RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 OR52N5Q8NH56 324 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 CTCFLQ8NI51 663 aaPredicted RBP3.86□□□□□ -1.79
ITGB1-214ENST00000488427 U2AF1L4Q8WU68 220 aaKnown RBP3.86□□□□□ -1.79
ITGB1-214ENST00000488427 ARHGAP45Q92619 1136 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 SYN2Q92777 582 aaPredicted RBP3.86□□□□□ -1.79
ITGB1-214ENST00000488427 MOB3AQ96BX8 217 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 RAD9AQ99638 391 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 MCRIP2Q9BUT9 160 aaKnown RBP3.86□□□□□ -1.79
ITGB1-214ENST00000488427 S1PR5Q9H228 398 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 PELI2Q9HAT8 420 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 ZNF701Q9NV72 531 aaPredicted RBP3.86□□□□□ -1.79
ITGB1-214ENST00000488427 OR6C2Q9NZP2 312 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 MTUS1Q9ULD2 1270 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 PADI2Q9Y2J8 665 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 MRPS28Q9Y2Q9 187 aaKnown RBP3.86□□□□□ -1.79
ITGB1-214ENST00000488427 TRPV2Q9Y5S1 764 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 SOS1Q07889 1333 aaPredicted RBP3.86□□□□□ -1.79
ITGB1-214ENST00000488427 NPC1L1Q9UHC9 1359 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 REV3LO60673 3130 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 TRBC2A0A5B9 178 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 O00370 1275 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 OR10H2O60403 315 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 ERAL1O75616 437 aaKnown RBP3.85□□□□□ -1.79
ITGB1-214ENST00000488427 PGM3O95394 542 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 NADKO95544 446 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-214ENST00000488427 RAF1P04049 648 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 CD48P09326 243 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 RAB40ALP0C0E4 278 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 IGHV4-31P0DP07 118 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 ZNF26P17031 533 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-214ENST00000488427 SP100P23497 879 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-214ENST00000488427 DNASE1P24855 282 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 EEF1DP29692 281 aaKnown RBP3.85□□□□□ -1.79
ITGB1-214ENST00000488427 CCR3P51677 355 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 PPARDQ03181 441 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 P2RY6Q15077 328 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 TMEM266Q2M3C6 531 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 ZC2HC1BQ5TFG8 222 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 PRR27Q6MZM9 219 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 PRR5LQ6MZQ0 368 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 ENOSF1Q7L5Y1 443 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 CAMKMTQ7Z624 323 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 CEP57L1Q8IYX8 460 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 TC2NQ8N9U0 490 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 FGFBP3Q8TAT2 258 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 HPSE2Q8WWQ2 592 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 NXNL1Q96CM4 212 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 HDAC11Q96DB2 347 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 THOC1Q96FV9 657 aaKnown RBP3.85□□□□□ -1.79
ITGB1-214ENST00000488427 LINC00479Q96M42 142 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 CFAP57Q96MR6 1250 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 ABHD1Q96SE0 405 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 FUCA2Q9BTY2 467 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 PRRG4Q9BZD6 226 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 ERVMER34-1Q9H9K5 563 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 A4GALTQ9NPC4 353 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 INTS9Q9NV88 658 aaKnown RBP3.85□□□□□ -1.79
ITGB1-214ENST00000488427 BARHL2Q9NY43 387 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 HAO2Q9NYQ3 351 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 NARFQ9UHQ1 456 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 CEP250Q9BV73 2442 aa3.85□□□□□ -1.79
ITGB1-214ENST00000488427 DDX60Q8IY21 1712 aaKnown RBP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 NEMP2A6NFY4 417 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 PI4K2BG5E9Z4 385 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 GLRA3O75311 464 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 NGFP01138 241 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 IGHV2-70P01814 119 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 MYBL1P10243 752 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 SAGP10523 405 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 IRF2P14316 349 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 CAPN2P17655 700 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 CSTF2P33240 577 aaKnown RBP eCLIP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 RAB28P51157 221 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 LUMP51884 338 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 PSMC6P62333 389 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 IRX1P78414 480 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 HNRNPDQ14103 355 aaKnown RBP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 FCN2Q15485 313 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 ITPRIPL2Q3MIP1 535 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 SLC35D3Q5M8T2 416 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 CYP4A22Q5TCH4 519 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 FIP1L1Q6UN15 594 aaKnown RBP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 METTL7BQ6UX53 244 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 PIGZQ86VD9 579 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 IQCHQ86VS3 1027 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 TMEM139Q8IV31 216 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 MFN1Q8IWA4 741 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 MAPKAPK5-AS1Q8N8E1 139 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 TDRD5Q8NAT2 981 aaKnown RBP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 OR5AP2Q8NGF4 316 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 ZFAND2BQ8WV99 257 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 TEKT4Q8WW24 435 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 WBP1Q96G27 269 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 ZNF830Q96NB3 372 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 FNBP1Q96RU3 617 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 KRT12Q99456 494 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 OLFM1Q99784 485 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 SLF1Q9BQI6 1058 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 SYT15Q9BQS2 421 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms