RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 SNPHO15079 494 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 KCNK2O95069 426 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 SOD1P00441 154 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 CDH1P12830 882 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 ACVR2AP27037 513 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 CASP3P42574 277 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 GPR1P46091 355 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 FGL2Q14314 439 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 RABL3Q5HYI8 236 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 PTRHD1Q6GMV3 140 aaKnown RBP13.26□□□□□ -0.29
COPS7B-221ENST00000488111 BLOC1S3Q6QNY0 202 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 SYT13Q7L8C5 426 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 LYSMD2Q8IV50 215 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 UBALD2Q8IYN6 164 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 SIDT2Q8NBJ9 832 aaKnown RBP13.26□□□□□ -0.29
COPS7B-221ENST00000488111 OR7G1Q8NGA0 311 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 LKAAEAR1Q8TD35 194 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 FAR1Q8WVX9 515 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 TMBIM1Q969X1 311 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 NODALQ96S42 347 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 MBOAT4Q96T53 435 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 SEPHS2Q99611 448 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 SDR39U1Q9NRG7 319 aaPredicted RBP13.26□□□□□ -0.29
COPS7B-221ENST00000488111 NUMA1Q14980 2115 aa13.26□□□□□ -0.29
COPS7B-221ENST00000488111 FAM172BPA6NC97 362 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 E5RI56 91 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 RNGTTO60942 597 aaKnown RBP13.25□□□□□ -0.29
COPS7B-221ENST00000488111 UPK1BO75841 260 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 SLC25A14O95258 325 aaPredicted RBP13.25□□□□□ -0.29
COPS7B-221ENST00000488111 TRIM16O95361 564 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 ESR1P03372 595 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 PCCBP05166 539 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 GSNP06396 782 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 RBP1P09455 135 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 IMPDH1P20839 514 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 CXCR2P25025 360 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 HTR1EP28566 365 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 PXNP49023 591 aaPredicted RBP13.25□□□□□ -0.29
COPS7B-221ENST00000488111 DGKEP52429 567 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 ACAP2Q15057 778 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 CATSPEREQ5SY80 951 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 AGAP9Q5VTM2 703 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 LYPLAL1Q5VWZ2 237 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 TTC23LQ6PF05 361 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 PAQR3Q6TCH7 311 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 IFNEQ86WN2 208 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 PROSER1Q86XN7 944 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 DCP2Q8IU60 420 aaKnown RBP13.25□□□□□ -0.29
COPS7B-221ENST00000488111 SYNPOQ8N3V7 929 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 TSPEARQ8WU66 669 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 BTN2A2Q8WVV5 523 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 FUBP1Q96AE4 644 aaKnown RBP13.25□□□□□ -0.29
COPS7B-221ENST00000488111 VPS33AQ96AX1 596 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 ULK4Q96C45 1275 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 YIPF6Q96EC8 236 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 L3HYPDHQ96EM0 354 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 TSPAN17Q96FV3 270 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 RNF145Q96MT1 663 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 MYOCQ99972 504 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 MBNL1Q9NR56 388 aaKnown RBP13.25□□□□□ -0.29
COPS7B-221ENST00000488111 TAS2R13Q9NYV9 303 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 TSR3Q9UJK0 312 aaKnown RBP13.25□□□□□ -0.29
COPS7B-221ENST00000488111 SCML1Q9UN30 329 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 MUC3AQ02505 3323 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 CHURC1-FNTBB4DL54 471 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 C9JVG2 144 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 DCNP07585 359 aaKnown RBP13.25□□□□□ -0.29
COPS7B-221ENST00000488111 NSG1P42857 185 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 PPP2CBP62714 309 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 PPP2CAP67775 309 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 CD47Q08722 323 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 EPS8Q12929 822 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 SLC13A2Q13183 592 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 WSCD2Q2TBF2 565 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 TMEM236Q5W0B7 351 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 KIAA2013Q8IYS2 634 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 CLYBLQ8N0X4 340 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 CLEC4FQ8N1N0 589 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 PJA1Q8NG27 643 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 HTRA1Q92743 480 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 GLYATL1Q969I3 302 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 FAM131CQ96AQ9 280 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 PHF21BQ96EK2 531 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 ZNF300Q96RE9 604 aaPredicted RBP13.25□□□□□ -0.29
COPS7B-221ENST00000488111 ANKHQ9HCJ1 492 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 PAK1IP1Q9NWT1 392 aaPredicted RBP13.25□□□□□ -0.29
COPS7B-221ENST00000488111 NFKBIL1Q9UBC1 381 aaPredicted RBP13.25□□□□□ -0.29
COPS7B-221ENST00000488111 UGT2A1Q9Y4X1 527 aa13.25□□□□□ -0.29
COPS7B-221ENST00000488111 SLC1A7O00341 560 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 KMOO15229 486 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 SCO2O43819 266 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 LTA4HP09960 611 aaKnown RBP13.24□□□□□ -0.29
COPS7B-221ENST00000488111 AGXTP21549 392 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 NFYCQ13952 458 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 SELPLGQ14242 412 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 GRB7Q14451 532 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 ZNF678Q5SXM1 525 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 USP30Q70CQ3 517 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 STK32CQ86UX6 486 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 FRMD1Q8N878 549 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms