RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 CDK15Q96Q40 435 aa8.09□□□□□ -1.11
PRKCB-208ENST00000487674 TUBB6Q9BUF5 446 aa8.09□□□□□ -1.11
PRKCB-208ENST00000487674 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.09□□□□□ -1.11
PRKCB-208ENST00000487674 CCDC68Q9H2F9 335 aa8.09□□□□□ -1.11
PRKCB-208ENST00000487674 HOMER3Q9NSC5 361 aa8.09□□□□□ -1.11
PRKCB-208ENST00000487674 PLA2G3Q9NZ20 509 aa8.09□□□□□ -1.11
PRKCB-208ENST00000487674 SAMD15Q9P1V8 674 aa8.09□□□□□ -1.11
PRKCB-208ENST00000487674 ABI3Q9P2A4 366 aa8.09□□□□□ -1.11
PRKCB-208ENST00000487674 COPG2Q9UBF2 871 aa8.09□□□□□ -1.11
PRKCB-208ENST00000487674 SUCOQ9UBS9 1254 aaKnown RBP8.09□□□□□ -1.11
PRKCB-208ENST00000487674 TEKT2Q9UIF3 430 aa8.09□□□□□ -1.11
PRKCB-208ENST00000487674 MKL2Q9ULH7 1088 aa8.09□□□□□ -1.11
PRKCB-208ENST00000487674 FAM237BA0A1B0GVD1 139 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 CTAGE9A4FU28 777 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 H0YIG0 161 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 PRAMEF2O60811 474 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 UNC5CO95185 931 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 RASAL1O95294 804 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 NSA2O95478 260 aaKnown RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 WDPCPO95876 746 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 SYF2O95926 243 aaKnown RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 F10P00742 488 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 MPC1LP0DKB6 136 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 MYBL2P10244 700 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 MLNP12872 115 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 HRH2P25021 359 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 KCNJ1P48048 391 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 EFNA3P52797 238 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 RPS15AP62244 130 aaKnown RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 MAT1AQ00266 395 aaKnown RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 ZNF33BQ06732 778 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 ART3Q13508 389 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 CUL1Q13616 776 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 DHX34Q14147 1143 aaKnown RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 LONRF1Q17RB8 773 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 SYT16Q17RD7 645 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.08□□□□□ -1.125e-6■□□□□ 9.8
PRKCB-208ENST00000487674 THEMIS2Q5TEJ8 643 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 MTFR2Q6P444 385 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 LRRC56Q8IYG6 542 aaPredicted RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 PRELID2Q8N945 189 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 ARMC2Q8NEN0 867 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 OR9A4Q8NGU2 314 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 DNAJB8Q8NHS0 232 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 ITLN2Q8WWU7 325 aaPredicted RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 METTL21AQ8WXB1 218 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 ASB11Q8WXH4 323 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 ZNF669Q96BR6 464 aaPredicted RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 ITPKCQ96DU7 683 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 MOCOSQ96EN8 888 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 IMMP1LQ96LU5 166 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 SLC30A3Q99726 388 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 VN1R1Q9GZP7 353 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 RUBCNLQ9H714 662 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 XAB2Q9HCS7 855 aaKnown RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 CCDC177Q9NQR7 707 aaPredicted RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 C19orf25Q9UFG5 118 aaPredicted RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 MED16Q9Y2X0 877 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 KLF2Q9Y5W3 355 aaPredicted RBP8.08□□□□□ -1.12
PRKCB-208ENST00000487674 COMMD10Q9Y6G5 202 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 SCN2AQ99250 2005 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 MYO7BQ6PIF6 2116 aa8.08□□□□□ -1.12
PRKCB-208ENST00000487674 KCNE1BA0A087WTH5 132 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 TRGV8A0A0C4DH27 118 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 MAGEB16A2A368 324 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 H7BY64 318 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 GFYI3L273 518 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 EIF3FO00303 357 aaPredicted RBP8.07□□□□□ -1.12
PRKCB-208ENST00000487674 ZBTB14O43829 449 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 KIF5CO60282 957 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 AVILO75366 819 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 SEC24DO94855 1032 aaPredicted RBP8.07□□□□□ -1.12
PRKCB-208ENST00000487674 PRF1P14222 555 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 MST1P26927 711 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 IMPA1P29218 277 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 SLC1A2P43004 574 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 CA7P43166 264 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 VPS41P49754 854 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 AGTR2P50052 363 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 TBPL1P62380 186 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 RBPJQ06330 500 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 GPS1Q13098 491 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 THOC5Q13769 683 aaKnown RBP8.07□□□□□ -1.12
PRKCB-208ENST00000487674 PTK6Q13882 451 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 TRIP13Q15645 432 aaPredicted RBP8.07□□□□□ -1.12
PRKCB-208ENST00000487674 MINDY4Q4G0A6 757 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 MFSD4BQ5TF39 518 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 ANKRD22Q5VYY1 191 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 PLAG1Q6DJT9 500 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 LRRC8EQ6NSJ5 796 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 TMEM207Q6UWW9 146 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 RPTNQ6XPR3 784 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 ZNF662Q6ZS27 426 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 LANCL3Q6ZV70 420 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 VN1R4Q7Z5H5 301 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 CAND1Q86VP6 1230 aaKnown RBP8.07□□□□□ -1.12
PRKCB-208ENST00000487674 GAS2L3Q86XJ1 694 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 PLD3Q8IV08 490 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 DENND6AQ8IWF6 608 aa8.07□□□□□ -1.12
PRKCB-208ENST00000487674 LMNTD2Q8IXW0 634 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms