RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 FAM198BQ6UWH4 519 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 SLCO4C1Q6ZQN7 724 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 ASPGQ86U10 573 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 LCA5Q86VQ0 697 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 MFSD9Q8NBP5 474 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 OR4K1Q8NGD4 311 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 PROKR1Q8TCW9 393 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 THAP11Q96EK4 314 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 CRELD1Q96HD1 420 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 C10orf90Q96M02 699 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 LRFN5Q96NI6 719 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 GBP5Q96PP8 586 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 RUFY1Q96T51 708 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 CAPS2Q9BXY5 557 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 ROPN1BQ9BZX4 212 aaPredicted RBP11.3□□□□□ -0.6
HPS4-214ENST00000485842 ROPN1Q9HAT0 212 aaPredicted RBP11.3□□□□□ -0.6
HPS4-214ENST00000485842 GPRC5BQ9NZH0 403 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 IL17BQ9UHF5 180 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 LGALS13Q9UHV8 139 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 TMCO1Q9UM00 188 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 MRPS18BQ9Y676 258 aaKnown RBP11.3□□□□□ -0.6
HPS4-214ENST00000485842 DMXL2Q8TDJ6 3036 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 KCNE1BA0A087WTH5 132 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 A8MT66 165 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 C9J4A7 227 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 TXNDC9O14530 226 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 NDUFS4O43181 175 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 PRAMEF4O60810 478 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 H2AFYO75367 372 aaKnown RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 MED26O95402 600 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 SBK3P0C264 359 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 SLC35G6P0C7Q6 338 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 KRT4P19013 534 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 EPORP19235 508 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 WT1P19544 449 aaPredicted RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 TAC1P20366 129 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 F8A1P23610 371 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 CXCR2P25025 360 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 ARL1P40616 181 aaPredicted RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 GCGRP47871 477 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 SCTRP47872 440 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 RPS18P62269 152 aaKnown RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 DCDP81605 110 aaKnown RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 IRF8Q02556 426 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 CHIT1Q13231 466 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 DOC2AQ14183 400 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 PCBP2Q15366 365 aaKnown RBP eCLIP11.29□□□□□ -0.6
HPS4-214ENST00000485842 COL28A1Q2UY09 1125 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 NKAIN1Q4KMZ8 207 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 PRAMEF9Q5VWM5 478 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 ZNF385CQ66K41 422 aaPredicted RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 ATG9BQ674R7 924 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 GOLGA7Q7Z5G4 137 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 MYLK4Q86YV6 388 aaPredicted RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 SRRM1Q8IYB3 904 aaKnown RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 KRT78Q8N1N4 520 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 CAMKVQ8NCB2 501 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 SLC13A3Q8WWT9 602 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 STARD8Q92502 1023 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 PTCD3Q96EY7 689 aaKnown RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 ZIM3Q96PE6 472 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 CENPHQ9H3R5 247 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 GEMIN8Q9NWZ8 242 aaKnown RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 IFT80Q9P2H3 777 aaPredicted RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 DCDC2Q9UHG0 476 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 MRPS2Q9Y399 296 aaKnown RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 TNPO3Q9Y5L0 923 aaKnown RBP11.29□□□□□ -0.6
HPS4-214ENST00000485842 MAU2Q9Y6X3 613 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 ASPMQ8IZT6 3477 aa11.29□□□□□ -0.6
HPS4-214ENST00000485842 STX16-NPEPL1H3BU86 382 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 STX16O14662 325 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 TERTO14746 1132 aaKnown RBP11.28□□□□□ -0.6
HPS4-214ENST00000485842 EFSO43281 561 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 CD22P20273 847 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 ITGAXP20702 1163 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 OR1D4P47884 311 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 PIK3CGP48736 1102 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 RPS15P62841 145 aaKnown RBP11.28□□□□□ -0.6
HPS4-214ENST00000485842 NFKB2Q00653 900 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 GTF2H2Q13888 395 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 NDUFA9Q16795 377 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 CEP85LQ5SZL2 805 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 ARHGAP40Q5TG30 622 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 MLIPQ5VWP3 458 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 GTF2H2CQ6P1K8 395 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 TMIGD1Q6UXZ0 262 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 SH2D5Q6ZV89 423 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 TRABD2AQ86V40 505 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.28□□□□□ -0.6
HPS4-214ENST00000485842 TMEM151AQ8N4L1 468 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 ENDOVQ8N8Q3 282 aaKnown RBP11.28□□□□□ -0.6
HPS4-214ENST00000485842 ANKRD53Q8N9V6 530 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 CCDC63Q8NA47 563 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 ZSCAN1Q8NBB4 408 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 KCT2Q8NC54 265 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 CCT6BQ92526 530 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 MOCOSQ96EN8 888 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 APOPT1Q96IL0 206 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 NSUN5Q96P11 429 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms