RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SCRG1O75711 98 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 WFS1O76024 890 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 BPGMP07738 259 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 ZNF28P17035 718 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 DNAJB13P59910 316 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 TRAF3Q13114 568 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 RTP5Q14D33 572 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 WASHC2DQ5SRD0 308 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 TMIGD1Q6UXZ0 262 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 VN1R4Q7Z5H5 301 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.04■□□□□ 0.324e-6■■■□□ 17.2
CPNE1-224ENST00000483359 KRT78Q8N1N4 520 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 CSNK1A1LQ8N752 337 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 EFCAB11Q9BUY7 163 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 GATA5Q9BWX5 397 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-224ENST00000483359 ASPSCR1Q9BZE9 553 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 ULBP3Q9BZM4 244 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 EHD1Q9H4M9 534 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 ASCL3Q9NQ33 180 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 NKIRAS1Q9NYS0 192 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 ZSCAN9O15535 394 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-224ENST00000483359 NDUFS4O43181 175 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 NTRK1P04629 796 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 CXCR2P25025 360 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 SLC5A2P31639 672 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 CPSF6Q16630 551 aaKnown RBP eCLIP17.04■□□□□ 0.32
CPNE1-224ENST00000483359 HHATQ5VTY9 493 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 TBC1D19Q8N5T2 526 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 OR4F6Q8NGB9 312 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 MDM1Q8TC05 714 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 CCT6BQ92526 530 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 DDA1Q9BW61 102 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 SLC7A5P2Q9GIP4 190 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 TEX51A0A1B0GUA7 166 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 H3BMH7 237 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 FFAR3O14843 346 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 GPR42O15529 346 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 ZNF749O43361 778 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 KIAA0754O94854 1291 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 CLDN9O95484 217 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 PCNAP12004 261 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 SCTRP47872 440 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 LCP2Q13094 533 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 PAGE2BQ5JRK9 111 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 GRHL2Q6ISB3 625 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 LETMD1Q6P1Q0 360 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 FRMD7Q6ZUT3 714 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 MILR1Q7Z6M3 343 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 NUDCD3Q8IVD9 361 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 MFSD9Q8NBP5 474 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 WDR34Q96EX3 536 aa17.03■□□□□ 0.32
CPNE1-224ENST00000483359 RUVBL1Q9Y265 456 aaKnown RBP17.03■□□□□ 0.32
CPNE1-224ENST00000483359 SRPX2O60687 465 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-224ENST00000483359 OR4F21O95013 312 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 OTCP00480 354 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 DHRS4L1P0CG22 281 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 NEFHP12036 1026 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 WDR4P57081 412 aaKnown RBP17.02■□□□□ 0.32
CPNE1-224ENST00000483359 ERVPABLB-1P60509 514 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 SHC2P98077 582 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 DDX39BQ13838 428 aaKnown RBP17.02■□□□□ 0.32
CPNE1-224ENST00000483359 TBCCQ15814 346 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.02■□□□□ 0.32
CPNE1-224ENST00000483359 SYVN1Q86TM6 617 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 ASPGQ86U10 573 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 DTWD1Q8N5C7 304 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 PPP1R14CQ8TAE6 165 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 SLC13A3Q8WWT9 602 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 SREK1Q8WXA9 508 aaKnown RBP17.02■□□□□ 0.32
CPNE1-224ENST00000483359 TEFMQ96QE5 360 aaKnown RBP17.02■□□□□ 0.32
CPNE1-224ENST00000483359 MID1IP1Q9NPA3 183 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 WDR70Q9NW82 654 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 DHCR7Q9UBM7 475 aaKnown RBP17.02■□□□□ 0.32
CPNE1-224ENST00000483359 ZNF225Q9UK10 706 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 ZNF490Q9ULM2 529 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-224ENST00000483359 PCDHGA3Q9Y5H0 932 aa17.02■□□□□ 0.32
CPNE1-224ENST00000483359 CDRT15L2A8MXV6 281 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 UBFD1O14562 309 aaKnown RBP17.02■□□□□ 0.31
CPNE1-224ENST00000483359 STK17BO94768 372 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 RELAQ04206 551 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 ASPHQ12797 758 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 CHI3L2Q15782 390 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 HIST2H2ACQ16777 129 aaPredicted RBP17.02■□□□□ 0.31
CPNE1-224ENST00000483359 HSP90B2PQ58FF3 399 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 TCTE1Q5JU00 501 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 LIPJQ5W064 366 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 HIST2H2AA3Q6FI13 130 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 MED27Q6P2C8 311 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 LSMEM2Q8N112 164 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 RNF175Q8N4F7 328 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 OR8K5Q8NH50 307 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 ZCCHC10Q8TBK6 192 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 CLIP3Q96DZ5 547 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 NTMT1Q9BV86 223 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 ACTR5Q9H9F9 607 aaPredicted RBP17.02■□□□□ 0.31
CPNE1-224ENST00000483359 THSD1Q9NS62 852 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 ZFP69BQ9UJL9 534 aa17.02■□□□□ 0.31
CPNE1-224ENST00000483359 KCNE1BA0A087WTH5 132 aa17.01■□□□□ 0.31
CPNE1-224ENST00000483359 SH3BGRLO75368 114 aa17.01■□□□□ 0.31
CPNE1-224ENST00000483359 MLYCDO95822 493 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms