RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TRIM43BA6NCK2 446 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ZNF99A8MXY4 864 aaPredicted RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 NPC1O15118 1278 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 PCDH7O60245 1069 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 CCNDBP1O95273 360 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 MT-ND2P03891 347 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ANXA4P09525 319 aaPredicted RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 MPC1LP0DKB6 136 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 PRPS1L1P21108 318 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 IMPA1P29218 277 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 MAGEA2P43356 314 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 RPS13P62277 151 aaKnown RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 ACSM2AQ08AH3 577 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ACOX1Q15067 660 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 SYTL3Q4VX76 610 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 TCEAL5Q5H9L2 206 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ACSM2BQ68CK6 577 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 METTL2BQ6P1Q9 378 aaKnown RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 SHQ1Q6PI26 577 aaKnown RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 TMEM220Q6QAJ8 160 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 SFTPA1Q8IWL2 248 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 NAGSQ8N159 534 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 CHCHD4Q8N4Q1 142 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 TERB1Q8NA31 727 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ZNF540Q8NDQ6 660 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 PIK3C3Q8NEB9 887 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 HUS1BQ8NHY5 278 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 LZICQ8WZA0 190 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 TRIM43Q96BQ3 446 aaPredicted RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 SH3YL1Q96HL8 342 aaPredicted RBP10.43□□□□□ -0.74
VPS52-217ENST00000478934 MRGPRX3Q96LB0 322 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 EPS8L2Q9H6S3 715 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 TPT1P8Q9HAU6 139 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 SPHK2Q9NRA0 654 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 SH3BP4Q9P0V3 963 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 ACSL6Q9UKU0 697 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 FZD4Q9ULV1 537 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 A0A0C4DFX4 3053 aa10.43□□□□□ -0.74
VPS52-217ENST00000478934 TMEM229AB2RXF0 380 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 M0R129 80 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 GCM2O75603 506 aaPredicted RBP10.42□□□□□ -0.74
VPS52-217ENST00000478934 SULT1C4O75897 302 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 SLCO2B1O94956 709 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 EPN2O95208 641 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 VIPP01282 170 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 LCKP06239 509 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 LINC00271P0C7V0 271 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 SYN1P17600 705 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 PRPH2P23942 346 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 VIPR1P32241 457 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 RECQLP46063 649 aaPredicted RBP10.42□□□□□ -0.74
VPS52-217ENST00000478934 OR1E2P47887 323 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 DGKEP52429 567 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 PTPN5P54829 565 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 MVKQ03426 396 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 RELAQ04206 551 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 PRSS53Q2L4Q9 553 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 PAGE2BQ5JRK9 111 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 HENMT1Q5T8I9 393 aaKnown RBP10.42□□□□□ -0.74
VPS52-217ENST00000478934 AHSA2Q719I0 299 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 ATG16L2Q8NAA4 619 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 OR7G3Q8NG95 312 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 OR52E4Q8NGH9 312 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 TCF25Q9BQ70 676 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 HEPHQ9BQS7 1158 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 DUSP26Q9BV47 211 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 SPNS1Q9H2V7 528 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 MAGIXQ9H6Y5 334 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 TMEM165Q9HC07 324 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 SPATA6Q9NWH7 488 aaPredicted RBP10.42□□□□□ -0.74
VPS52-217ENST00000478934 DAPK2Q9UIK4 370 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 BLOC1S6Q9UL45 172 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS52-217ENST00000478934 ERGIC3Q9Y282 383 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 SAMHD1Q9Y3Z3 626 aaKnown RBP10.42□□□□□ -0.74
VPS52-217ENST00000478934 PCDHGA10Q9Y5H3 936 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 GMPPBQ9Y5P6 360 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 GNG14A0A1W2PPG7 69 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 FABP3P05413 133 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 HLA-EP13747 358 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 TMEM115Q12893 351 aaPredicted RBP10.42□□□□□ -0.74
VPS52-217ENST00000478934 TUBA3CQ13748 450 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 SYT16Q17RD7 645 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 RGS21Q2M5E4 152 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 GPR153Q6NV75 609 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 TSEN54Q7Z6J9 526 aaKnown RBP10.42□□□□□ -0.74
VPS52-217ENST00000478934 TMPRSS11BQ86T26 416 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 SERPINA11Q86U17 422 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 C12orf40Q86WS4 652 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 HORMAD1Q86X24 394 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 HIPK1Q86Z02 1210 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 TCAIMQ8N3R3 496 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 ZNF740Q8NDX6 193 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 OR52J3Q8NH60 311 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 CIDECQ96AQ7 238 aaPredicted RBP10.42□□□□□ -0.74
VPS52-217ENST00000478934 TMEM159Q96B96 161 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 SORBS1Q9BX66 1292 aaKnown RBP10.42□□□□□ -0.74
VPS52-217ENST00000478934 TDP1Q9NUW8 608 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 GPATCH2Q9NW75 528 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 KIF17Q9P2E2 1029 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms