RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 IPMKQ8NFU5 416 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 OR1L3Q8NH93 324 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 OR2T6Q8NHC8 308 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 FIBINQ8TAL6 211 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 FAM162AQ96A26 154 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 C4orf45Q96LM5 186 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 C10orf90Q96M02 699 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 MAP3K3Q99759 626 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 ANP32EQ9BTT0 268 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 KATNB1Q9BVA0 655 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 CLEC7AQ9BXN2 247 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 THAP2Q9H0W7 228 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 MID1IP1Q9NPA3 183 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 BARHL2Q9NY43 387 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 AKAP7Q9P0M2 348 aaPredicted RBP3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 PPP2R2CQ9Y2T4 447 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 KRT87PA6NCN2 255 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 ANXA2P2A6NMY6 339 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 ZNF195O14628 629 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 TXNL1O43396 289 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 PRPSAP2O60256 369 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 LUC7L3O95232 432 aaKnown RBP3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 SEC24AO95486 1093 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 OLFM2O95897 454 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 CGAP01215 116 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 VTNP04004 478 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 PRKAR1AP10644 381 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 CETN2P41208 172 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 SLC6A12P48065 614 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 PAX9P55771 341 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 GSDMDP57764 484 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 STARD6P59095 220 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 RASGEF1BQ0VAM2 473 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 PTGISQ16647 500 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 TYSND1Q2T9J0 566 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 SMU1Q2TAY7 513 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 C14orf177Q52M58 125 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 LACTB2Q53H82 288 aaPredicted RBP3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 C6orf136Q5SQH8 315 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 FIP1L1Q6UN15 594 aaKnown RBP3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 OTOAQ7RTW8 1153 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 PTAR1Q7Z6K3 402 aaPredicted RBP3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 TBC1D21Q8IYX1 336 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 KLHDC1Q8N7A1 406 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 ZBTB44Q8NCP5 570 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 OR7A2PQ8NGA2 310 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 SMAP2Q8WU79 429 aaPredicted RBP3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 ATP6V0A1Q93050 837 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 MR1Q95460 341 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 TSACCQ96A04 125 aaPredicted RBP3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 AZIN2Q96A70 460 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 PGM2Q96G03 612 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 SPATA33Q96N06 139 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 LPAR4Q99677 370 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 NKX3-1Q99801 234 aaPredicted RBP3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 OPRPNQ99935 248 aaPredicted RBP3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 FERMT1Q9BQL6 677 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 SYT15Q9BQS2 421 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 TEX13BQ9BXU2 312 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 MAN2C1Q9NTJ4 1040 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 ZDHHC18Q9NUE0 388 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 TMEM181Q9P2C4 612 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 SNX7Q9UNH6 387 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 DUSP12Q9UNI6 340 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 EXOGQ9Y2C4 368 aaKnown RBP3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 POMT1Q9Y6A1 747 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 IKBKGQ9Y6K9 419 aa3.43□□□□□ -1.86
SMARCA1-204ENST00000478420 MYH14Q7Z406 1995 aaKnown RBP3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 TRAV34A0A0B4J273 112 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 RGSL1A5PLK6 1076 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 K7EPI3 171 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 FPGTO14772 594 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 WDR46O15213 610 aaKnown RBP3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 ARHGEF9O43307 516 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 APBB3O95704 486 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 SERPINB2P05120 415 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 TYMPP19971 482 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 LEPRP48357 1165 aaKnown RBP3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 NPY4RP50391 375 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 DNA2P51530 1060 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 GPC3P51654 580 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 MTCP1P56278 107 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 IRX1P78414 480 aaPredicted RBP3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 MORF4L2Q15014 288 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 ZNF74Q16587 644 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 UGCGQ16739 394 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 HLA-BQ31612 363 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 FAM174BQ3ZCQ3 159 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 ZRANB3Q5FWF4 1079 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 LRRC73Q5JTD7 316 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 WLSQ5T9L3 541 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 CTR9Q6PD62 1173 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 IL17RELQ6ZVW7 336 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 ZER1Q7Z7L7 766 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 AMIGO1Q86WK6 493 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 TUSC5Q8IXB3 177 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 ZNF614Q8N883 585 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 SLC37A3Q8NCC5 494 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 SETD6Q8TBK2 473 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 SPATA18Q8TC71 538 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms