RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 SUPT7LO94864 414 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 KLHL18O94889 574 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 OR4F21O95013 312 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 CCNDBP1O95273 360 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 ETHE1O95571 254 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 STATHP02808 62 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 S100BP04271 92 aaPredicted RBP9.9□□□□□ -0.82
CASC3-204ENST00000474190 SMIM10L1P0DMW3 83 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 FGF5P12034 268 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 JUPP14923 745 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 CHN1P15882 459 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 PIK3CGP48736 1102 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 CYP4F3Q08477 520 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 LCP2Q13094 533 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 RTP5Q14D33 572 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 CHI3L2Q15782 390 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 HKDC1Q2TB90 917 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 XKR6Q5GH73 641 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 ARL13AQ5H913 290 aaPredicted RBP9.9□□□□□ -0.82
CASC3-204ENST00000474190 ZNF385CQ66K41 422 aaPredicted RBP9.9□□□□□ -0.82
CASC3-204ENST00000474190 GRHL2Q6ISB3 625 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 IGF2-ASQ6U949 168 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 RAB11FIP2Q7L804 512 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 UBE3DQ7Z6J8 389 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 TMEM151BQ8IW70 566 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.9□□□□□ -0.82
CASC3-204ENST00000474190 CCNYL1Q8N7R7 359 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 MFSD9Q8NBP5 474 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 OR7G3Q8NG95 312 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 GRAMD1AQ96CP6 724 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 CCDC126Q96EE4 140 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 RNF31Q96EP0 1072 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 PTCD3Q96EY7 689 aaKnown RBP9.9□□□□□ -0.82
CASC3-204ENST00000474190 SMIM10Q96HG1 83 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 C10orf90Q96M02 699 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 CTRCQ99895 268 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 ZFYVE21Q9BQ24 234 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 ZNF717Q9BY31 904 aaPredicted RBP9.9□□□□□ -0.82
CASC3-204ENST00000474190 DRC3Q9H069 523 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 TUBB1Q9H4B7 451 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 NT5DC2Q9H857 520 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 AKIRIN1Q9H9L7 192 aaPredicted RBP9.9□□□□□ -0.82
CASC3-204ENST00000474190 PDE7BQ9NP56 450 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 MED4Q9NPJ6 270 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 LHX9Q9NQ69 397 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 FGF21Q9NSA1 209 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 FARSBQ9NSD9 589 aaKnown RBP9.9□□□□□ -0.82
CASC3-204ENST00000474190 STARD5Q9NSY2 213 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 FOXJ2Q9P0K8 574 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 SATB2Q9UPW6 733 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 CCL27Q9Y4X3 112 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 TMEM184BQ9Y519 407 aaPredicted RBP9.9□□□□□ -0.82
CASC3-204ENST00000474190 PCDHGA8Q9Y5G5 932 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 PCDHGA3Q9Y5H0 932 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 B3GALT1Q9Y5Z6 326 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 AP1M2Q9Y6Q5 423 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 ADAMTS20P59510 1910 aa9.9□□□□□ -0.83
CASC3-204ENST00000474190 CDRT15L2A8MXV6 281 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 TMEM233B4DJY2 109 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 H0YIV9 168 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 PLD2O14939 933 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 UGDHO60701 494 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 DNAJB6O75190 326 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 KATNA1O75449 491 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 DXOO77932 396 aaKnown RBP9.89□□□□□ -0.83
CASC3-204ENST00000474190 ESRRBO95718 433 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 SERPINE1P05121 402 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 JUNP05412 331 aaKnown RBP9.89□□□□□ -0.83
CASC3-204ENST00000474190 NR1D1P20393 614 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 MLLT3P42568 568 aaPredicted RBP9.89□□□□□ -0.83
CASC3-204ENST00000474190 NEK2P51955 445 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 OCRLQ01968 901 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 IRF8Q02556 426 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 GALNT1Q10472 559 aaPredicted RBP9.89□□□□□ -0.83
CASC3-204ENST00000474190 BST1Q10588 318 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 RCN2Q14257 317 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 ADPRMQ3LIE5 342 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 LIPJQ5W064 366 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 LCN10Q6JVE6 187 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 PWWP2BQ6NUJ5 590 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 NUDCD3Q8IVD9 361 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 GALNT15Q8N3T1 639 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 AFAP1L2Q8N4X5 818 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 CCDC63Q8NA47 563 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 ZNF473Q8WTR7 871 aaKnown RBP9.89□□□□□ -0.83
CASC3-204ENST00000474190 USP7Q93009 1102 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 CNDP1Q96KN2 507 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 SLC46A1Q96NT5 459 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 OR6C1Q96RD1 312 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 SELENOSQ9BQE4 189 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 EFCAB11Q9BUY7 163 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 SCNM1Q9BWG6 230 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 CAPS2Q9BXY5 557 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 SHCBP1LQ9BZQ2 653 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 SLC6A16Q9GZN6 736 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 IQCGQ9H095 443 aaKnown RBP9.89□□□□□ -0.83
CASC3-204ENST00000474190 KLHL31Q9H511 634 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 SLC22A11Q9NSA0 550 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 ZDHHC2Q9UIJ5 367 aa9.89□□□□□ -0.83
CASC3-204ENST00000474190 PLCL2Q9UPR0 1127 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms