RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 LCMT2O60294 686 aaKnown RBP16.2■□□□□ 0.18
COMMD3-210ENST00000472610 DPM1O60762 260 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 IPO13O94829 963 aaKnown RBP16.2■□□□□ 0.18
COMMD3-210ENST00000472610 WISP1O95388 367 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 CSRP3P50461 194 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 GUCY2DQ02846 1103 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 AIMP2Q13155 320 aaKnown RBP16.2■□□□□ 0.18
COMMD3-210ENST00000472610 MYBPC3Q14896 1274 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 TUBB8Q3ZCM7 444 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 VWA2Q5GFL6 755 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 SHISA6Q6ZSJ9 500 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 ASPGQ86U10 573 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 GALNT16Q8N428 558 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 PPM1NQ8N819 430 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 MFSD9Q8NBP5 474 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 FBF1Q8TES7 1133 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 SLC13A3Q8WWT9 602 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 OR4K3Q96R72 315 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 NUDT9Q9BW91 350 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 TGIF2Q9GZN2 237 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 TSPYL1Q9H0U9 437 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 EPN3Q9H201 632 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 CAB39LQ9H9S4 337 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 ZDHHC18Q9NUE0 388 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 MTRF1LQ9UGC7 380 aaKnown RBP16.2■□□□□ 0.18
COMMD3-210ENST00000472610 HS3ST3B1Q9Y662 390 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 KCNE2Q9Y6J6 123 aa16.2■□□□□ 0.18
COMMD3-210ENST00000472610 GCN1Q92616 2671 aaKnown RBP16.2■□□□□ 0.18
COMMD3-210ENST00000472610 TRBC2A0A5B9 178 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 ESYT3A0FGR9 886 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 FEZF1A0PJY2 475 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 CTAGE15A4D2H0 777 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 SOCS6O14544 535 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 WISP3O95389 354 aaPredicted RBP16.19■□□□□ 0.18
COMMD3-210ENST00000472610 NSA2O95478 260 aaKnown RBP16.19■□□□□ 0.18
COMMD3-210ENST00000472610 ALPPP05187 535 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 SLC35G6P0C7Q6 338 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 CTAGE8P0CG41 777 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 CCDC166P0CW27 439 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 BCL6P41182 706 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 RAB10P61026 200 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 ATP6V0D1P61421 351 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 TSNQ15631 228 aaKnown RBP16.19■□□□□ 0.18
COMMD3-210ENST00000472610 GLE1Q53GS7 698 aaKnown RBP16.19■□□□□ 0.18
COMMD3-210ENST00000472610 VWA5B1Q5TIE3 1220 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 KIRREL2Q6UWL6 708 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 CTAGE6Q86UF2 777 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 THOC6Q86W42 341 aaKnown RBP16.19■□□□□ 0.18
COMMD3-210ENST00000472610 TMEM151BQ8IW70 566 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 CTAGE4Q8IX94 777 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 AMER3Q8N944 861 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 SLC5A11Q8WWX8 675 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 NEIL2Q969S2 332 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 TRIM4Q9C037 500 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 PELI2Q9HAT8 420 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 C3orf18Q9UK00 162 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 FBXL4Q9UKA2 621 aa16.19■□□□□ 0.18
COMMD3-210ENST00000472610 PHGDHO43175 533 aaKnown RBP16.18■□□□□ 0.18
COMMD3-210ENST00000472610 OR1F1O43749 312 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 CXCR2P25025 360 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 PHBP35232 272 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 EMP2P54851 167 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 KCNC4Q03721 635 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 PWP1Q13610 501 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 TGFBIQ15582 683 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 ZKSCAN8Q15776 578 aaPredicted RBP16.18■□□□□ 0.18
COMMD3-210ENST00000472610 CDKL4Q5MAI5 379 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 TMEM214Q6NUQ4 689 aaKnown RBP16.18■□□□□ 0.18
COMMD3-210ENST00000472610 KLHDC8AQ8IYD2 350 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 PRSS58Q8IYP2 241 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 TCAIMQ8N3R3 496 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 KIF18AQ8NI77 898 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 TRIM44Q96DX7 344 aaPredicted RBP16.18■□□□□ 0.18
COMMD3-210ENST00000472610 CAPS2Q9BXY5 557 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 ANKHQ9HCJ1 492 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 SLC22A14Q9Y267 594 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 SLC22A7Q9Y694 548 aa16.18■□□□□ 0.18
COMMD3-210ENST00000472610 HELZ2Q9BYK8 2649 aaKnown RBP16.17■□□□□ 0.18
COMMD3-210ENST00000472610 IDSB3KWA1 339 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 MAP2K7O14733 419 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 HEXBP07686 556 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 ACPPP15309 386 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 CD1DP15813 335 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 AHRP35869 848 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 CATSPEREQ5SY80 951 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 IRAK1BP1Q5VVH5 260 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 ATG9BQ674R7 924 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 NIPAL1Q6NVV3 410 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 NXPE4Q6UWF7 544 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 LAPTM4BQ86VI4 370 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 GPSM1Q86YR5 675 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 RELL1Q8IUW5 271 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 OR11G2Q8NGC1 345 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 OR9A4Q8NGU2 314 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 TM9SF4Q92544 642 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 RHBDF1Q96CC6 855 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 UBXN10Q96LJ8 280 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 AIF1LQ9BQI0 150 aa16.17■□□□□ 0.18
COMMD3-210ENST00000472610 ZNF552Q9H707 407 aaPredicted RBP16.17■□□□□ 0.18
COMMD3-210ENST00000472610 CNOT10Q9H9A5 744 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms