RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 HUNKP57058 714 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 PRKCZQ05513 592 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 P2RY6Q15077 328 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 CDC37Q16543 378 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-202ENST00000471307 QRICH1Q2TAL8 776 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 PWWP2BQ6NUJ5 590 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 PSRC1Q6PGN9 363 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-202ENST00000471307 CORO6Q6QEF8 472 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 INTS8Q75QN2 995 aaKnown RBP4.85□□□□□ -1.63
CCDC39-202ENST00000471307 SLC16A9Q7RTY1 509 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 OR1J1Q8NGS3 322 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 OR2T6Q8NHC8 308 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 PIBF1Q8WXW3 757 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 FAM81BQ96LP2 452 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 CEP295NLQ96MC4 621 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 SLF1Q9BQI6 1058 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 ZMYND12Q9H0C1 365 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 RSPH9Q9H1X1 276 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-202ENST00000471307 CPVLQ9H3G5 476 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 RPAP3Q9H6T3 665 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-202ENST00000471307 C6orf50Q9HD87 102 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 AGTPBP1Q9UPW5 1226 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 OTOFQ9HC10 1997 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 PTPRFP10586 1907 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 ABCB11O95342 1321 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 PRSS51A0A1B0GVH4 220 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 FAM170AA1A519 330 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 A6NCN8 305 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 SMCO2A6NFE2 343 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 MITFO75030 526 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-202ENST00000471307 TPOP07202 933 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 ACP2P11117 423 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 VDRP11473 427 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 KRT2P35908 639 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 NAPAP54920 295 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 PNRC1Q12796 327 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-202ENST00000471307 MELKQ14680 651 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 GRTP1Q5TC63 336 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 ZNF613Q6PF04 617 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 BHLHB9Q6PI77 547 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 ANKRD23Q86SG2 305 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 BLIDQ8IZY5 108 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 DNAJC22Q8N4W6 341 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 PAPD5Q8NDF8 572 aaKnown RBP4.84□□□□□ -1.63
CCDC39-202ENST00000471307 ZNF396Q96N95 335 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-202ENST00000471307 TREX2Q9BQ50 279 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-202ENST00000471307 PSTPIP2Q9H939 334 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 SLC38A10Q9HBR0 1119 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 NSMCE4AQ9NXX6 385 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 VPS54Q9P1Q0 977 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 CFAP45Q9UL16 551 aa4.84□□□□□ -1.63
CCDC39-202ENST00000471307 MRPL11Q9Y3B7 192 aaKnown RBP4.84□□□□□ -1.63
CCDC39-202ENST00000471307 TP53BP1Q12888 1972 aaPredicted RBP4.84□□□□□ -1.64
CCDC39-202ENST00000471307 TCHHQ07283 1943 aa4.84□□□□□ -1.64
CCDC39-202ENST00000471307 CCL15-CCL14A0A0B4J2E2 113 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 A0A1W2PRQ8 180 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 FSD2A1L4K1 749 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 LRRC72A6NJI9 287 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 E9PI62 339 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 ZNF197O14709 1029 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 KLF11O14901 512 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 SSX4O60224 188 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 CRLF1O75462 422 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 PRKRAO75569 313 aaKnown RBP4.83□□□□□ -1.64
CCDC39-202ENST00000471307 DCAF7P61962 342 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 IRX3P78415 501 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-202ENST00000471307 CCL15Q16663 113 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 RILPL1Q5EBL4 403 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 TCTE1Q5JU00 501 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 DCAF10Q5QP82 559 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 CFAP58Q5T655 872 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 MFSD4BQ5TF39 518 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 TMCO3Q6UWJ1 677 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 MARVELD2Q8N4S9 558 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 FGFBP3Q8TAT2 258 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 ERLEC1Q96DZ1 483 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 SDF4Q9BRK5 362 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 RTN4RQ9BZR6 473 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 CCDC68Q9H2F9 335 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 HRH4Q9H3N8 390 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 CHMP1AQ9HD42 196 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-202ENST00000471307 ZCCHC17Q9NP64 241 aaKnown RBP4.83□□□□□ -1.64
CCDC39-202ENST00000471307 EIF2B3Q9NR50 452 aaKnown RBP4.83□□□□□ -1.64
CCDC39-202ENST00000471307 PLCXD1Q9NUJ7 323 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 TAS2R14Q9NYV8 317 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 PAK5Q9P286 719 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 OSGIN1Q9UJX0 560 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 CCPG1Q9ULG6 757 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 RLFQ13129 1914 aa4.83□□□□□ -1.64
CCDC39-202ENST00000471307 PARP14Q460N5 1801 aa4.82□□□□□ -1.64
CCDC39-202ENST00000471307 B4DLN1 442 aa4.82□□□□□ -1.64
CCDC39-202ENST00000471307 PDHXO00330 501 aa4.82□□□□□ -1.64
CCDC39-202ENST00000471307 MEIS2O14770 477 aa4.82□□□□□ -1.64
CCDC39-202ENST00000471307 GFPT2O94808 682 aa4.82□□□□□ -1.64
CCDC39-202ENST00000471307 SLC25A27O95847 323 aa4.82□□□□□ -1.64
CCDC39-202ENST00000471307 POLR2MP0CAP2 368 aa4.82□□□□□ -1.64
CCDC39-202ENST00000471307 SLC6A6P31641 620 aa4.82□□□□□ -1.64
CCDC39-202ENST00000471307 PSMB10P40306 273 aa4.82□□□□□ -1.64
CCDC39-202ENST00000471307 MAGEA11P43364 429 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms