RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ARRDC1-AS1Q9H2J1 176 aa12.23□□□□□ -0.45
TRAF4-208ENST00000469529 LRTM1Q9HBL6 345 aa12.23□□□□□ -0.45
TRAF4-208ENST00000469529 SLC6A20Q9NP91 592 aa12.23□□□□□ -0.45
TRAF4-208ENST00000469529 C1GALT1Q9NS00 363 aa12.23□□□□□ -0.45
TRAF4-208ENST00000469529 FARSBQ9NSD9 589 aaKnown RBP12.23□□□□□ -0.45
TRAF4-208ENST00000469529 PILRAQ9UKJ1 303 aa12.23□□□□□ -0.45
TRAF4-208ENST00000469529 PADI4Q9UM07 663 aa12.23□□□□□ -0.45
TRAF4-208ENST00000469529 WBP11Q9Y2W2 641 aaKnown RBP12.23□□□□□ -0.45
TRAF4-208ENST00000469529 GPR45Q9Y5Y3 372 aa12.23□□□□□ -0.45
TRAF4-208ENST00000469529 RNF215Q9Y6U7 377 aa12.23□□□□□ -0.45
TRAF4-208ENST00000469529 SDK1Q7Z5N4 2213 aa12.23□□□□□ -0.45
TRAF4-208ENST00000469529 RALGAPA1Q6GYQ0 2036 aa12.23□□□□□ -0.45
TRAF4-208ENST00000469529 CEP192Q8TEP8 1941 aa12.23□□□□□ -0.45
TRAF4-208ENST00000469529 TNRC6BQ9UPQ9 1833 aaKnown RBP12.23□□□□□ -0.45
TRAF4-208ENST00000469529 FRYLO94915 3013 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 A0A0J9YY10 115 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 EME2A4GXA9 379 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-208ENST00000469529 ANKDD1BA6NHY2 528 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 RHPN2P1A8MT19 583 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 E9PBE3 544 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 KLHL41O60662 606 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 HNRNPCL1O60812 293 aaKnown RBP12.22□□□□□ -0.45
TRAF4-208ENST00000469529 PEX11AO75192 247 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 TBX6O95947 436 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-208ENST00000469529 PROS1P07225 676 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 ALDOCP09972 364 aaKnown RBP12.22□□□□□ -0.45
TRAF4-208ENST00000469529 PRPS2P11908 318 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 SDHBP21912 280 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 RPS15AP62244 130 aaKnown RBP12.22□□□□□ -0.45
TRAF4-208ENST00000469529 PWP1Q13610 501 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 SQLEQ14534 574 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 HERC3Q15034 1050 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 ADPRMQ3LIE5 342 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 RFTN2Q52LD8 501 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-208ENST00000469529 DEPDC1Q5TB30 811 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 NXNQ6DKJ4 435 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 ARMC6Q6NXE6 501 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 FOXR1Q6PIV2 292 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 FIGLAQ6QHK4 219 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 PRR23CQ6ZRP0 262 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 VN1R5Q7Z5H4 357 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 ANKRD53Q8N9V6 530 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 MFSD9Q8NBP5 474 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 ZNF740Q8NDX6 193 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 TRPV3Q8NET8 790 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 BAHD1Q8TBE0 780 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-208ENST00000469529 NAT6Q93015 286 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 ERP27Q96DN0 273 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 DPYSL5Q9BPU6 564 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 TBC1D10AQ9BXI6 508 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 ABCG4Q9H172 646 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 SPNS1Q9H2V7 528 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 SEMA6CQ9H3T2 930 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 IL21RQ9HBE5 538 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 DMRT3Q9NQL9 472 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 ABCF3Q9NUQ8 709 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 DLL3Q9NYJ7 618 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 AHSPQ9NZD4 102 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 CDV3Q9UKY7 258 aaKnown RBP12.22□□□□□ -0.45
TRAF4-208ENST00000469529 PTGDR2Q9Y5Y4 395 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 DMDP11532 3685 aa12.22□□□□□ -0.45
TRAF4-208ENST00000469529 IGHV1OR21-1A0A087WYE8 117 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 LY6G6EA0A0G2JKS1 128 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 DYTNA2CJ06 578 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 MAGEB17A8MXT2 336 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 ANKRD28O15084 1053 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 TOX3O15405 576 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 B4GAT1O43505 415 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 LCMT2O60294 686 aaKnown RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 SEC22BO75396 215 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 C9P02748 559 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 T-ENOLP0DO92 83 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 AMD1P17707 334 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 ENGP17813 658 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 NCF2P19878 526 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 MAPK1P28482 360 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 DUSP3P51452 185 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 C21orf58P58505 322 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 TBL3Q12788 808 aaKnown RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 KLF10Q13118 480 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 BIRC2Q13490 618 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 NR6A1Q15406 480 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 NR0B2Q15466 257 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 PROX2Q3B8N5 592 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 PDCD4Q53EL6 469 aaKnown RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 TMEM35AQ53FP2 167 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 SGO1Q5FBB7 561 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 TMEM198Q66K66 360 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 WDR74Q6RFH5 385 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 SCIMPQ6UWF3 145 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 ERMP1Q7Z2K6 904 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 DGLUCYQ7Z3D6 616 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 METTL4Q8N3J2 472 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 OR10G6Q8NH81 332 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 RP9Q8TA86 221 aaKnown RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 JPH3Q8WXH2 748 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 RSC1A1Q92681 617 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 MTFMTQ96DP5 389 aaKnown RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 CMTM5Q96DZ9 223 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 ZDHHC12Q96GR4 267 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms