RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 DPH7Q9BTV6 452 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 TRIM45Q9H8W5 580 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-203ENST00000467533 ALKBH4Q9NXW9 302 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 HCN3Q9P1Z3 774 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 MTRF1LQ9UGC7 380 aaKnown RBP9.58□□□□□ -0.88
HDAC3-203ENST00000467533 LIPGQ9Y5X9 500 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 SONP18583 2426 aaKnown RBP9.57□□□□□ -0.88
HDAC3-203ENST00000467533 ZNF487B1APH4 448 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 DVL2O14641 736 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 PHF1O43189 567 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-203ENST00000467533 PHF2O75151 1096 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 DNAJB6O75190 326 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 PROSCO94903 275 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 HRGP04196 525 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 CYP1A2P05177 515 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 SKILP12757 684 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 TRHRP34981 398 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-203ENST00000467533 GEMP55040 296 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 OR4D2P58180 307 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 MLF1P58340 268 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 PPIAP62937 165 aaKnown RBP9.57□□□□□ -0.88
HDAC3-203ENST00000467533 HSPA14Q0VDF9 509 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 ABRAXAS2Q15018 415 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 NDUFA9Q16795 377 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 CCDC38Q502W7 563 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 FBXO42Q6P3S6 717 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 VRK3Q8IV63 474 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 PIANPQ8IYJ0 282 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 OR2A1Q8NGT9 310 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 OR9A4Q8NGU2 314 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 OR51Q1Q8NH59 317 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 LINC01560Q8TB33 94 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 ELP5Q8TE02 316 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 PIGTQ969N2 578 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 PIP5K1AQ99755 562 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 ACAT2Q9BWD1 397 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 RBCK1Q9BYM8 510 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 SYNPO2LQ9H987 977 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 FOXD3Q9UJU5 478 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-203ENST00000467533 DUSP10Q9Y6W6 482 aa9.57□□□□□ -0.88
HDAC3-203ENST00000467533 CUBNO60494 3623 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 A0A1W2PPR1 153 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 KRT87PA6NCN2 255 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 HSPB2A8KAH6 182 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 H0YIG0 161 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 TXNDC9O14530 226 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 P2RX6O15547 441 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 CDC123O75794 336 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-203ENST00000467533 CNOT4O95628 575 aaKnown RBP9.56□□□□□ -0.88
HDAC3-203ENST00000467533 KRT1P04264 644 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 TUBB4AP04350 444 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 BDKRB1P46663 353 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 FAM53BQ14153 422 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 ITIH4Q14624 930 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 NSDHLQ15738 373 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 HSPB2Q16082 182 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 FBXL19-AS1Q494R0 122 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 ODF2Q5BJF6 829 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 WLSQ5T9L3 541 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 PACS1Q6VY07 963 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 BZW1Q7L1Q6 419 aaKnown RBP9.56□□□□□ -0.88
HDAC3-203ENST00000467533 MDGA2Q7Z553 956 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 KIF18BQ86Y91 864 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 ULK2Q8IYT8 1036 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 SHISA5Q8N114 240 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 ARHGEF39Q8N4T4 335 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 TMEM156Q8N614 296 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 MCOLN3Q8TDD5 553 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 TSLPQ969D9 159 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 ZDHHC11Q9H8X9 412 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 MRPS30Q9NP92 439 aaKnown RBP9.56□□□□□ -0.88
HDAC3-203ENST00000467533 LIMA1Q9UHB6 759 aaKnown RBP9.56□□□□□ -0.88
HDAC3-203ENST00000467533 PCYOX1Q9UHG3 505 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 ACAD8Q9UKU7 415 aa9.56□□□□□ -0.88
HDAC3-203ENST00000467533 F8W8V4 182 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 ANXA9O76027 345 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 STATHP02808 62 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 NID1P14543 1247 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 CCR7P32248 378 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 MAN2A2P49641 1150 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 KIAA0930Q6ICG6 404 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-203ENST00000467533 PRSS41Q7RTY9 318 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 SLC22A16Q86VW1 577 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 RAD51AP1Q96B01 352 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 VAT1Q99536 393 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 CCL19Q99731 98 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 C19orf43Q9BQ61 176 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 CNPPD1Q9BV87 410 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 TSSK1BQ9BXA7 367 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 DEFB126Q9BYW3 111 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 TTTY12Q9BZ98 90 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 GBA3Q9H227 469 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 EXO5Q9H790 373 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 TIMMDC1Q9NPL8 285 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 AIPL1Q9NZN9 384 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 CTTNBP2NLQ9P2B4 639 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 SAE1Q9UBE0 346 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-203ENST00000467533 ANK2Q01484 3957 aa9.55□□□□□ -0.88
HDAC3-203ENST00000467533 MPDZO75970 2070 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 A0A1W2PPV9 198 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms