RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 HKDC1Q2TB90 917 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 RBM20Q5T481 1227 aaKnown RBP11.3□□□□□ -0.6
RTCB-202ENST00000463455 HECTD2Q5U5R9 776 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 B3GNTL1Q67FW5 361 aaPredicted RBP11.3□□□□□ -0.6
RTCB-202ENST00000463455 NIPAL1Q6NVV3 410 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 RIPOR1Q6ZS17 1223 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 NDUFAF7Q7L592 441 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 STRA8Q7Z7C7 330 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 KLHL7Q8IXQ5 586 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 METTL27Q8N6F8 245 aaPredicted RBP11.3□□□□□ -0.6
RTCB-202ENST00000463455 AMER3Q8N944 861 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 ABHD11Q8NFV4 315 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 OR56A3Q8NH54 315 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 MMABQ96EY8 250 aaPredicted RBP11.3□□□□□ -0.6
RTCB-202ENST00000463455 LINGO1Q96FE5 620 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 PRAP1Q96NZ9 151 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 LMF1Q96S06 567 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 BARD1Q99728 777 aaKnown RBP11.3□□□□□ -0.6
RTCB-202ENST00000463455 WDR83Q9BRX9 315 aaKnown RBP11.3□□□□□ -0.6
RTCB-202ENST00000463455 ILKAPQ9H0C8 392 aaPredicted RBP11.3□□□□□ -0.6
RTCB-202ENST00000463455 RIC8BQ9NVN3 520 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 ADAMTS6Q9UKP5 1117 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 CHMP2BQ9UQN3 213 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 VWA7Q9Y334 891 aa11.3□□□□□ -0.6
RTCB-202ENST00000463455 LOC102723996A0A087X1L8 192 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 NSG1A0A0A6YYJ2 146 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 FAM187AA6NFU0 413 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 EFCAB8A8MWE9 144 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 TP73O15350 636 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 EIF3HO15372 352 aaKnown RBP eCLIP11.29□□□□□ -0.6
RTCB-202ENST00000463455 TTI1O43156 1089 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 SLC35G6P0C7Q6 338 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 ICAM2P13598 275 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 ZNF37AP17032 561 aaPredicted RBP11.29□□□□□ -0.6
RTCB-202ENST00000463455 IL10P22301 178 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 EMP2P54851 167 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 SKP1P63208 163 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 CSNK1G2P78368 415 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 NAE1Q13564 534 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 PHKG1Q16816 387 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 PLEKHN1Q494U1 663 aaPredicted RBP11.29□□□□□ -0.6
RTCB-202ENST00000463455 VWA2Q5GFL6 755 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 CRB2Q5IJ48 1285 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 FHL5Q5TD97 284 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 TMEM214Q6NUQ4 689 aaKnown RBP11.29□□□□□ -0.6
RTCB-202ENST00000463455 TRMT10BQ6PF06 316 aaKnown RBP11.29□□□□□ -0.6
RTCB-202ENST00000463455 ISLR2Q6UXK2 745 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 SHISA6Q6ZSJ9 500 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 VN1R4Q7Z5H5 301 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 KBTBD2Q8IY47 623 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 NKAPQ8N5F7 415 aaKnown RBP11.29□□□□□ -0.6
RTCB-202ENST00000463455 TBC1D19Q8N5T2 526 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 GPATCH11Q8N954 259 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 FBXL8Q96CD0 374 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 TM4SF19Q96DZ7 209 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 CFAP36Q96G28 342 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 TRIM51Q9BSJ1 452 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 SYNPO2LQ9H987 977 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 POPDC3Q9HBV1 291 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 ARL15Q9NXU5 204 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 MOCS1Q9NZB8 636 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 SLC22A7Q9Y694 548 aa11.29□□□□□ -0.6
RTCB-202ENST00000463455 HIVEP3Q5T1R4 2406 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 NAV2Q8IVL1 2488 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 POLEQ07864 2286 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 P2RX6O15547 441 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 SERPINA7P05543 415 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 HEXBP07686 556 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 COX6A1P12074 109 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 NPPBP16860 134 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 TSFMP43897 325 aaKnown RBP11.28□□□□□ -0.6
RTCB-202ENST00000463455 CCR8P51685 355 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 CDKL1Q00532 357 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 PDIA2Q13087 525 aaKnown RBP11.28□□□□□ -0.6
RTCB-202ENST00000463455 MFAP5Q13361 173 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 TMEM205Q6UW68 189 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 CYS1Q717R9 158 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 MAATS1Q7Z4T9 603 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 ZC3HC1Q86WB0 502 aaKnown RBP11.28□□□□□ -0.6
RTCB-202ENST00000463455 TMEM151BQ8IW70 566 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 ZC3H7AQ8IWR0 971 aaKnown RBP11.28□□□□□ -0.6
RTCB-202ENST00000463455 DTWD1Q8N5C7 304 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 FBXO36Q8NEA4 188 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 OR4K1Q8NGD4 311 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 SNRNP40Q96DI7 357 aaKnown RBP11.28□□□□□ -0.6
RTCB-202ENST00000463455 THOC3Q96J01 351 aaKnown RBP11.28□□□□□ -0.6
RTCB-202ENST00000463455 VPS39Q96JC1 886 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 AGPAT4Q9NRZ5 378 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 WHRNQ9P202 907 aa11.28□□□□□ -0.6
RTCB-202ENST00000463455 C19orf25Q9UFG5 118 aaPredicted RBP11.28□□□□□ -0.6
RTCB-202ENST00000463455 IGHV1-45A0A0A0MS14 117 aa11.27□□□□□ -0.61
RTCB-202ENST00000463455 A0A0A6YYC8 382 aaPredicted RBP11.27□□□□□ -0.61
RTCB-202ENST00000463455 TRBC2A0A5B9 178 aa11.27□□□□□ -0.61
RTCB-202ENST00000463455 TCP11X1B4DZS4 312 aa11.27□□□□□ -0.61
RTCB-202ENST00000463455 I3L1I5 382 aaPredicted RBP11.27□□□□□ -0.61
RTCB-202ENST00000463455 BMP10O95393 424 aa11.27□□□□□ -0.61
RTCB-202ENST00000463455 PRR35P0CG20 571 aa11.27□□□□□ -0.61
RTCB-202ENST00000463455 CDH1P12830 882 aa11.27□□□□□ -0.61
RTCB-202ENST00000463455 GP1BBP13224 206 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms