RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 MCUQ8NE86 351 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 OR51Q1Q8NH59 317 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 MAGOHBQ96A72 148 aaKnown RBP14.56□□□□□ -0.08
SKA3-204ENST00000462482 IMMP1LQ96LU5 166 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 CCDC138Q96M89 665 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 CYTH2Q99418 400 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 GPR21Q99679 349 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 SLC30A3Q99726 388 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 FAM167BQ9BTA0 163 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 KCNK13Q9HB14 408 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 CHST11Q9NPF2 352 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 KLF2Q9Y5W3 355 aaPredicted RBP14.56□□□□□ -0.08
SKA3-204ENST00000462482 HIVEP3Q5T1R4 2406 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 NBPF19A0A087WUL8 3843 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 CREBBPQ92793 2442 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 FER1L5A0AVI2 2057 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 KCNE1BA0A087WTH5 132 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 GOLGA8MH3BSY2 632 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 STATHP02808 62 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 HIST1H2AGP0C0S8 130 aaPredicted RBP14.55□□□□□ -0.08
SKA3-204ENST00000462482 SLC35G6P0C7Q6 338 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 HIST1H2ADP20671 130 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 CCND1P24385 295 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 IMPA1P29218 277 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 SLC1A2P43004 574 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 TBPL1P62380 186 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 SKP1P63208 163 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 EXT1Q16394 746 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 ZNF766Q5HY98 468 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 ANKRD22Q5VYY1 191 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 ZNF662Q6ZS27 426 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 MRGPRGQ86SM5 289 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 GAS2L3Q86XJ1 694 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 MCEMP1Q8IX19 187 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 CPNE9Q8IYJ1 553 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 ARHGEF39Q8N4T4 335 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 ZNF808Q8N4W9 903 aaPredicted RBP14.55□□□□□ -0.08
SKA3-204ENST00000462482 TBC1D19Q8N5T2 526 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 GIMAP7Q8NHV1 300 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 ALKBH8Q96BT7 664 aaKnown RBP14.55□□□□□ -0.08
SKA3-204ENST00000462482 MAGED4Q96JG8 741 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 HIST1H2AHQ96KK5 128 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 NAP1L3Q99457 506 aaPredicted RBP14.55□□□□□ -0.08
SKA3-204ENST00000462482 HIST1H2AJQ99878 128 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 H2AFJQ9BTM1 129 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 HCN3Q9P1Z3 774 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 SH3BGRL2Q9UJC5 107 aa14.55□□□□□ -0.08
SKA3-204ENST00000462482 IGHV3-20A0A0C4DH32 117 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 C8GP07360 202 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 ESRRAP11474 423 aaPredicted RBP14.54□□□□□ -0.08
SKA3-204ENST00000462482 IL1RNP18510 177 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 IL10P22301 178 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 ELAVL4P26378 380 aaKnown RBP14.54□□□□□ -0.08
SKA3-204ENST00000462482 BCL6P41182 706 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 TAS2R50P59544 299 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 MEP1AQ16819 746 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 ACER2Q5QJU3 275 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 ZNF549Q6P9A3 640 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 CYHR1Q6ZMK1 362 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 PIWIL4Q7Z3Z4 852 aaKnown RBP14.54□□□□□ -0.08
SKA3-204ENST00000462482 ASPGQ86U10 573 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 LRRC56Q8IYG6 542 aaPredicted RBP14.54□□□□□ -0.08
SKA3-204ENST00000462482 MYO1HQ8N1T3 1032 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 SLC5A8Q8N695 610 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 HORMAD2Q8N7B1 307 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 ZCCHC10Q8TBK6 192 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 CD200R1Q8TD46 325 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 SLC13A3Q8WWT9 602 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 SERPINB12Q96P63 405 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 UTP23Q9BRU9 249 aaKnown RBP14.54□□□□□ -0.08
SKA3-204ENST00000462482 SYNPO2LQ9H987 977 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 FBXO5Q9UKT4 447 aa14.54□□□□□ -0.08
SKA3-204ENST00000462482 POLEQ07864 2286 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 ZCWPW2A0A1B0GU75 182 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 SGK494L7N484 410 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 CD46P15529 392 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 CA7P43166 264 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 SMSP52788 366 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 SP140Q13342 867 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 TMEM214Q6NUQ4 689 aaKnown RBP14.53□□□□□ -0.08
SKA3-204ENST00000462482 AGTRAPQ6RW13 159 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 LANCL3Q6ZV70 420 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 VN1R4Q7Z5H5 301 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 ANKRD37Q7Z713 158 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.53□□□□□ -0.08
SKA3-204ENST00000462482 FAM98AQ8NCA5 519 aaKnown RBP14.53□□□□□ -0.08
SKA3-204ENST00000462482 M1APQ8TC57 530 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 ITLN2Q8WWU7 325 aaPredicted RBP14.53□□□□□ -0.08
SKA3-204ENST00000462482 CCDC120Q96HB5 630 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 PHF12Q96QT6 1004 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 LPAR4Q99677 370 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 HAUS8Q9BT25 410 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 AARSD1Q9BTE6 412 aaKnown RBP14.53□□□□□ -0.08
SKA3-204ENST00000462482 UNKQ9C0B0 810 aaKnown RBP14.53□□□□□ -0.08
SKA3-204ENST00000462482 PARVBQ9HBI1 364 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 TAS2R13Q9NYV9 303 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 PCDHGB6Q9Y5F9 930 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 PCM1Q15154 2024 aa14.53□□□□□ -0.08
SKA3-204ENST00000462482 FAM227AF5H4B4 570 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 SLC16A5O15375 505 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms