RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 SLC1A7O00341 560 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 TFECO14948 347 aaPredicted RBP2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 PI15O43692 258 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 F3P13726 295 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 MYOGP15173 224 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 PDHA2P29803 388 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 RGS7P49802 495 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 MFAP3P55082 362 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 MTCP1P56278 107 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 DSCR10P59022 87 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 DHODHQ02127 395 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 SULT2A1Q06520 285 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 MZT1Q08AG7 82 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 ZNF273Q14593 569 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 UGCGQ16739 394 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 KRT71Q3SY84 523 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 KRBOX4Q5JUW0 171 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 C6orf136Q5SQH8 315 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 ANKRD33Q7Z3H0 272 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 CPEB2Q7Z5Q1 589 aaKnown RBP2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 ABI3BPQ7Z7G0 1075 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 LRTM2Q8N967 370 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 IQUBQ8NA54 791 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 SLC26A7Q8TE54 656 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 LRRC15Q8TF66 581 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 CHURC1Q8WUH1 139 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 SNRNP27Q8WVK2 155 aaKnown RBP2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 NSMAFQ92636 917 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 P2RX5Q93086 422 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 PYCR2Q96C36 320 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 SLC45A3Q96JT2 553 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 SERINC2Q96SA4 455 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 DCTN5Q9BTE1 182 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 KATNB1Q9BVA0 655 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 RNF121Q9H920 327 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 TBC1D13Q9NVG8 400 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 HACD3Q9P035 362 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 LNPEPQ9UIQ6 1025 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 SPATA31D1Q6ZQQ2 1576 aa2.49□□□□□ -2.01
SCARNA18-201ENST00000459004 A0A1B0GVY2 172 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 MTMR11A4FU01 709 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 ANXA2P2A6NMY6 339 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 NPIPB9F8W1W9 429 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 PI4K2BG5E9Z4 385 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 SURF4O15260 269 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 CYTIPO60759 359 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 PENKP01210 267 aaPredicted RBP2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 YES1P07947 543 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 STAG3L1P0CL83 205 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 THEGLP0DJG4 465 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 CD59P13987 128 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 TCF4P15884 667 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 ACADSP16219 412 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 PTAFRP25105 342 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 OR1D5P58170 312 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 PAX8Q06710 450 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 KCTD2Q14681 263 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 C1orf141Q5JVX7 400 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 SUSD4Q5VX71 490 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 PRSS55Q6UWB4 352 aaPredicted RBP2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 LCLAT1Q6UWP7 414 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 PPP1R21Q6ZMI0 780 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 GDPGP1Q6ZNW5 385 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 GPRIN3Q6ZVF9 776 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 NRARPQ7Z6K4 114 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 ZFAND4Q86XD8 727 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 CCAR2Q8N163 923 aaKnown RBP2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 SPEM1Q8N4L4 309 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 TCEANCQ8N8B7 351 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 CCDC63Q8NA47 563 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 AQP11Q8NBQ7 271 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 OR4C15Q8NGM1 316 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 KIF18AQ8NI77 898 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 C11orf45Q8TAV5 145 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 ATP8B4Q8TF62 1192 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 RASL10AQ92737 203 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 CNRIP1Q96F85 164 aaPredicted RBP2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 ATXN7L3BQ96GX2 97 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 FER1L6-AS2Q96M78 137 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 GDAP1L1Q96MZ0 367 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 LGMNQ99538 433 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 PI4K2AQ9BTU6 479 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 FAM129AQ9BZQ8 928 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 TRIM6Q9C030 488 aaPredicted RBP2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 PFDN4Q9NQP4 134 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 NFKBIL1Q9UBC1 381 aaPredicted RBP2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 CFDP1Q9UEE9 299 aaPredicted RBP2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 FBXL4Q9UKA2 621 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 HEG1Q9ULI3 1381 aa2.48□□□□□ -2.01
SCARNA18-201ENST00000459004 A0A087WV48 116 aa2.47□□□□□ -2.01
SCARNA18-201ENST00000459004 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.47□□□□□ -2.01
SCARNA18-201ENST00000459004 IQCMA0A1B0GVH7 501 aa2.47□□□□□ -2.01
SCARNA18-201ENST00000459004 A0A1W2PPR1 153 aa2.47□□□□□ -2.01
SCARNA18-201ENST00000459004 TMEM150CB9EJG8 249 aa2.47□□□□□ -2.01
SCARNA18-201ENST00000459004 F8VVB4 439 aa2.47□□□□□ -2.01
SCARNA18-201ENST00000459004 F8VWA3 439 aa2.47□□□□□ -2.01
SCARNA18-201ENST00000459004 K7EQD1 137 aa2.47□□□□□ -2.01
SCARNA18-201ENST00000459004 DKC1O60832 514 aaKnown RBP eCLIP2.47□□□□□ -2.01not detected■■■■■ 57.9
SCARNA18-201ENST00000459004 SPP1P10451 314 aa2.47□□□□□ -2.01
SCARNA18-201ENST00000459004 FDPSP14324 419 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms