RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SYPL2Q5VXT5 272 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 C6orf120Q7Z4R8 191 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 C7orf43Q8WVR3 580 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 MPP4Q96JB8 637 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 HS6ST2Q96MM7 605 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 GHRLQ9UBU3 117 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 EGFL7Q9UHF1 273 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 CYP8B1Q9UNU6 501 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 OARD1Q9Y530 152 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 TRMUO75648 421 aaKnown RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 H1F0P07305 194 aaKnown RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 GRK5P34947 590 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 RORAP35398 523 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 CCNIQ14094 377 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 MFSD13AQ14CX5 517 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 ZIK1Q3SY52 487 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 TTMPQ5BVD1 217 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 PACRGLQ8N7B6 248 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 AUTS2Q8WXX7 1259 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 MTERF1Q99551 399 aaKnown RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 PTPN18Q99952 460 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 RABL2AQ9UBK7 228 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 RABL2BQ9UNT1 228 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 IL33O95760 270 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF865P0CJ78 1059 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 SLC6A6P31641 620 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 KCNQ1P51787 676 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 PAQR3Q6TCH7 311 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 CILP2Q8IUL8 1156 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 SMOQ99835 787 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 ABCG8Q9H221 673 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 CXorf56Q9H5V9 222 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 DNAJB4Q9UDY4 337 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 RIMKLBQ9ULI2 386 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 SRPK3Q9UPE1 567 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF840PA6NDX5 716 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 GPR32O75388 356 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 ANGPTL1O95841 491 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 TBX18O95935 607 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 CSTBP04080 98 aaKnown RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 RLN2P04090 185 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 HRGP04196 525 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 HNRNPA2B1P22626 353 aaKnown RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 CTBP2P56545 445 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 VLDLRP98155 873 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 GK3PQ14409 553 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 RAB39AQ14964 217 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 RALGPS2Q86X27 583 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 SDR16C5Q8N3Y7 309 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 HAVCR2Q8TDQ0 301 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF516Q92618 1163 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 PIGKQ92643 395 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF689Q96CS4 500 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 SLC2A13Q96QE2 648 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 SLC24A3Q9HC58 644 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 PREBQ9HCU5 417 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 CLIC1O00299 241 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 CLDN7O95471 211 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 MATN1P21941 496 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 GK5Q6ZS86 529 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 TAS1R3Q7RTX0 852 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 BBS10Q8TAM1 723 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 DNAJA4Q8WW22 397 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 PMEPA1Q969W9 287 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 MECRQ9BV79 373 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 TMEM121BQ9BXQ6 578 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 POLR2J3Q9H1A7 115 aaKnown RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 NKX2-4Q9H2Z4 354 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 PIAS3Q9Y6X2 628 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 IDH3BO43837 385 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 ECI2O75521 394 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 CDH1P12830 882 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 UQCRC2P22695 453 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 GPR143P51810 404 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 EMX2Q04743 252 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 ARSJQ5FYB0 599 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 OLFML2AQ68BL7 652 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 IQCKQ8N0W5 287 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 OR5P2Q8WZ92 322 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 NXPE2Q96DL1 559 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 GATA5Q9BWX5 397 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 EBPLQ9BY08 206 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 NENFQ9UMX5 172 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 FAM159BA6NKW6 160 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 AGRPO00253 132 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 HOXB9P17482 250 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 PPP2R2BQ00005 443 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 PCDH1Q08174 1060 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 FADDQ13158 208 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 MYO18AQ92614 2054 aaKnown RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 NUAK1O60285 661 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 GJA1P17302 382 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 POU6F2P78424 691 aaPredicted RBP8.29□□□□□ -1.08
PTPN3-204ENST00000446349 ABHD18Q0P651 414 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 CRB2Q5IJ48 1285 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 CHST4Q8NCG5 386 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 FAM84AQ96KN4 292 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 TEPSINQ96N21 525 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 MAPKAP1Q9BPZ7 522 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms