RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 BCL7BQ9BQE9 202 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 ANKRA2Q9H9E1 313 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 CDK5RAP2Q96SN8 1893 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 HHLA1C9JL84 531 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 KLK1P06870 262 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 BLVRAP53004 296 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 SRP54P61011 504 aaKnown RBP16.12■□□□□ 0.17
TCOF1-206ENST00000445265 RPP38P78345 283 aaKnown RBP16.12■□□□□ 0.17
TCOF1-206ENST00000445265 FATE1Q969F0 183 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 CAMK1GQ96NX5 476 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 ZCCHC3Q9NUD5 404 aaKnown RBP16.12■□□□□ 0.17
TCOF1-206ENST00000445265 SNX4O95219 450 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 IST1P53990 364 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 RBBP4Q09028 425 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 IL18Q14116 193 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 MFSD4BQ5TF39 518 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 LCN1P1Q5VSP4 162 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 IGSF21Q96ID5 467 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 DOHHQ9BU89 302 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 ABCB9Q9NP78 766 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 IL36AQ9UHA7 158 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 ING4Q9UNL4 249 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 DCTP40126 519 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 ZSWIM7Q19AV6 140 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 VN1R5Q7Z5H4 357 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 CLIP4Q8N3C7 705 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 SCAIQ8N9R8 606 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 PKP4Q99569 1192 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 GABRQQ9UN88 632 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 PCDHB11Q9Y5F2 797 aa16.12■□□□□ 0.17
TCOF1-206ENST00000445265 A0A1B0GVG6 124 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 CDKL4Q5MAI5 379 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 LINC00471Q8N535 108 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 AUTS2Q8WXX7 1259 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 UCK2Q9BZX2 261 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 REEP4Q9H6H4 257 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 DUS2Q9NX74 493 aaKnown RBP16.11■□□□□ 0.17
TCOF1-206ENST00000445265 BACE2Q9Y5Z0 518 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 FABP12A6NFH5 140 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 DHFRP00374 187 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 HOXD8P13378 290 aaPredicted RBP16.11■□□□□ 0.17
TCOF1-206ENST00000445265 SLC15A1P46059 708 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 NPRL3Q12980 569 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 C18orf21Q32NC0 220 aaPredicted RBP16.11■□□□□ 0.17
TCOF1-206ENST00000445265 CRTC2Q53ET0 693 aaPredicted RBP16.11■□□□□ 0.17
TCOF1-206ENST00000445265 Q6ZVL8 140 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 EGFL6Q8IUX8 553 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 AQP11Q8NBQ7 271 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 MDGA1Q8NFP4 955 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 LGALS12Q96DT0 336 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 NUS1Q96E22 293 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 ALPK1Q96QP1 1244 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 LHPPQ9H008 270 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 WDR37Q9Y2I8 494 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 A0A1W2PQ45 241 aaPredicted RBP16.11■□□□□ 0.17
TCOF1-206ENST00000445265 A0A1W2PQY0 241 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 CD72P21854 359 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 TAS2R50P59544 299 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 ADAM17P78536 824 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 KCNC4Q03721 635 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 SHQ1Q6PI26 577 aaKnown RBP16.11■□□□□ 0.17
TCOF1-206ENST00000445265 UFD1Q92890 307 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 RERGQ96A58 199 aaPredicted RBP16.11■□□□□ 0.17
TCOF1-206ENST00000445265 VAPAQ9P0L0 249 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 ST14Q9Y5Y6 855 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 INPPL1O15357 1258 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 IFNGP01579 166 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 CYBAP13498 195 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 MAP2K4P45985 399 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 PLA2G16P53816 162 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 CRB2Q5IJ48 1285 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 ANKRD26P1Q6NSI1 321 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 FAM43BQ6ZT52 329 aaPredicted RBP16.11■□□□□ 0.17
TCOF1-206ENST00000445265 TEX26Q8N6G2 289 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 GPR78Q96P69 363 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 GORASP2Q9H8Y8 452 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 NEUROD4Q9HD90 331 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 IL1RAPQ9NPH3 570 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 P2RX2Q9UBL9 471 aa16.11■□□□□ 0.17
TCOF1-206ENST00000445265 EVPLQ92817 2033 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 C6orf47O95873 294 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 EPHX1P07099 455 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 BPIP17213 487 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 PSMD8P48556 350 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 LGALS3BPQ08380 585 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 TSTQ16762 297 aaKnown RBP16.1■□□□□ 0.17
TCOF1-206ENST00000445265 OTUD1Q5VV17 481 aaPredicted RBP16.1■□□□□ 0.17
TCOF1-206ENST00000445265 TMIGD1Q6UXZ0 262 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 CEACAM20Q6UY09 585 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 TSPYL5Q86VY4 417 aaPredicted RBP16.1■□□□□ 0.17
TCOF1-206ENST00000445265 PROKR1Q8TCW9 393 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 RHBDF1Q96CC6 855 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 TRIM39Q9HCM9 518 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 PAK1IP1Q9NWT1 392 aaPredicted RBP16.1■□□□□ 0.17
TCOF1-206ENST00000445265 HTR1BP28222 390 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 CCR8P51685 355 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 OR2B6P58173 313 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 ZNF45Q02386 682 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 LMAN2Q12907 356 aa16.1■□□□□ 0.17
TCOF1-206ENST00000445265 BOCQ9BWV1 1114 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms