RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 COPEO14579 308 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 STX16O14662 325 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 CLGNO14967 610 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 KLK10O43240 276 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 EFSO43281 561 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 OR1F1O43749 312 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 SPAG7O75391 227 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 WT1P19544 449 aaPredicted RBP15.29■□□□□ 0.04
USP39-205ENST00000442708 STAT5AP42229 794 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 SCTRP47872 440 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 E2F2Q14209 437 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 MAP7Q14244 749 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 SLBPQ14493 270 aaKnown RBP eCLIP15.29■□□□□ 0.04
USP39-205ENST00000442708 CASP8Q14790 479 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 TCTE1Q5JU00 501 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 C1orf189Q5VU69 101 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 FAM219BQ5XKK7 198 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 RHBDD2Q6NTF9 364 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 DSELQ8IZU8 1212 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 CLIP3Q96DZ5 547 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 WDR34Q96EX3 536 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 APOPT1Q96IL0 206 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 LRFN5Q96NI6 719 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 RUFY1Q96T51 708 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 ZBTB26Q9HCK0 441 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 CUTCQ9NTM9 273 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 SLC17A7Q9P2U7 560 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 GRID1Q9ULK0 1009 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 ZNF490Q9ULM2 529 aaPredicted RBP15.29■□□□□ 0.04
USP39-205ENST00000442708 TMCO1Q9UM00 188 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 RUVBL1Q9Y265 456 aaKnown RBP15.29■□□□□ 0.04
USP39-205ENST00000442708 AP1M2Q9Y6Q5 423 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 SCN3AQ9NY46 2000 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 A0A087WV48 116 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 A0A1B0GTL3 188 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 HYKKA2RU49 373 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 OR7A17O14581 309 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 TERTO14746 1132 aaKnown RBP15.28■□□□□ 0.04
USP39-205ENST00000442708 RGS16O15492 202 aaPredicted RBP15.28■□□□□ 0.04
USP39-205ENST00000442708 WFS1O76024 890 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 RPS17P08708 135 aaKnown RBP15.28■□□□□ 0.04
USP39-205ENST00000442708 EPB42P16452 691 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 F8A1P23610 371 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 ATP5F1P24539 256 aaPredicted RBP15.28■□□□□ 0.04
USP39-205ENST00000442708 CASP2P42575 452 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 CCT5P48643 541 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 NFKB2Q00653 900 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 PCDH1Q08174 1060 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 CHIT1Q13231 466 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 GTF2H2Q13888 395 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 GRM7Q14831 915 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 XKR6Q5GH73 641 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 ADNP2Q6IQ32 1131 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 GTF2H2CQ6P1K8 395 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 ZNF517Q6ZMY9 492 aaPredicted RBP15.28■□□□□ 0.04
USP39-205ENST00000442708 TTLL10Q6ZVT0 673 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 EXOC3L1Q86VI1 746 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 ESX1Q8N693 406 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 ZNF483Q8TF39 744 aaPredicted RBP15.28■□□□□ 0.04
USP39-205ENST00000442708 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.28■□□□□ 0.04
USP39-205ENST00000442708 RERGQ96A58 199 aaPredicted RBP15.28■□□□□ 0.04
USP39-205ENST00000442708 THAP11Q96EK4 314 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 PTCD3Q96EY7 689 aaKnown RBP15.28■□□□□ 0.04
USP39-205ENST00000442708 GBP5Q96PP8 586 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 TMEM237Q96Q45 408 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 AIF1LQ9BQI0 150 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 CAPS2Q9BXY5 557 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 DPH1Q9BZG8 443 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 AICDAQ9GZX7 198 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 EHD1Q9H4M9 534 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 LHX9Q9NQ69 397 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 SLC22A11Q9NSA0 550 aa15.28■□□□□ 0.04
USP39-205ENST00000442708 TNPO3Q9Y5L0 923 aaKnown RBP15.28■□□□□ 0.04
USP39-205ENST00000442708 AGPSO00116 658 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 PPP6CO00743 305 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 CAPN1P07384 714 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 ATXN8OSP0DMR3 200 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 LIFP15018 202 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 GRK3P35626 688 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 CYP4F2P78329 520 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 IRF8Q02556 426 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 TLE3Q04726 772 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 ABHD18Q0P651 414 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 HYAL2Q12891 473 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 RBBP5Q15291 538 aaKnown RBP15.27■□□□□ 0.04
USP39-205ENST00000442708 TBCCQ15814 346 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 CCDC153Q494R4 210 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 UNC50Q53HI1 259 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 ZNF678Q5SXM1 525 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 METTL2BQ6P1Q9 378 aaKnown RBP15.27■□□□□ 0.04
USP39-205ENST00000442708 ZYG11AQ6WRX3 759 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 VN1R5Q7Z5H4 357 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 TMEM151BQ8IW70 566 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.27■□□□□ 0.04
USP39-205ENST00000442708 METTL27Q8N6F8 245 aaPredicted RBP15.27■□□□□ 0.04
USP39-205ENST00000442708 KCT2Q8NC54 265 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 CREB3L4Q8TEY5 395 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 CT55Q8WUE5 264 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 PGM2Q96G03 612 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 NDC1Q9BTX1 674 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms