RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 NUDT17P0C025 328 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 C1GALT1C1LP0DN25 315 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 GSTM2P28161 218 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 HSD17B3P37058 310 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 BCL6P41182 706 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 GLRBP48167 497 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 ALDH18A1P54886 795 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 REEP5Q00765 189 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 PCDH1Q08174 1060 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 CDC20Q12834 499 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 PWP1Q13610 501 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 SETDB1Q15047 1291 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 HKDC1Q2TB90 917 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 C18orf21Q32NC0 220 aaPredicted RBP14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 CATSPEREQ5SY80 951 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 C1orf189Q5VU69 101 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 ATG9BQ674R7 924 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 MRPL14Q6P1L8 145 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 SLCO4C1Q6ZQN7 724 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 VN1R4Q7Z5H5 301 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 TMPRSS11BQ86T26 416 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 ASPGQ86U10 573 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 PLD3Q8IV08 490 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 ENDOVQ8N8Q3 282 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 EXT2Q93063 718 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 WDR34Q96EX3 536 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 WBP1Q96G27 269 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 SEC16BQ96JE7 1060 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 C10orf90Q96M02 699 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 PARD6BQ9BYG5 372 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 SLC26A1Q9H2B4 701 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 NT5DC2Q9H857 520 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 IFT80Q9P2H3 777 aaPredicted RBP14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 COPG2Q9UBF2 871 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 NDOR1Q9UHB4 597 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 ZFP69BQ9UJL9 534 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 RAB21Q9UL25 225 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 TCFL5Q9UL49 500 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 TNPO3Q9Y5L0 923 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 MRPS18BQ9Y676 258 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 NUP210LQ5VU65 1888 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 SCN3AQ9NY46 2000 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 ERVH48-1M5A8F1 160 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 NKX2-8O15522 239 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 P2RX6O15547 441 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 OR1F1O43749 312 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 SHBGP04278 402 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 SLC35G6P0C7Q6 338 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 ITGAXP20702 1163 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 SCTRP47872 440 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 E2F2Q14209 437 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 PCBP2Q15366 365 aaKnown RBP eCLIP14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 PDK4Q16654 411 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 UGT8Q16880 541 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 OVCH1Q7RTY7 1134 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 KRT78Q8N1N4 520 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 LSM14AQ8ND56 463 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 TRPV3Q8NET8 790 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 TTLQ8NG68 377 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 MZB1Q8WU39 189 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 SLC13A3Q8WWT9 602 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 UBL7Q96S82 380 aaPredicted RBP14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 MRPL57Q9BQC6 102 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 WDR54Q9H977 334 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 ZNF304Q9HCX3 659 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 ZNF358Q9NW07 568 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 OPTCQ9UBM4 332 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 V9GYY5 206 aaPredicted RBP14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 ZFHX4Q86UP3 3567 aa14.32□□□□□ -0.12
CSNK1E-210ENST00000442216 K7EPI3 171 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 CCNT2O60583 730 aaKnown RBP14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 CDH16O75309 829 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 KLF7O75840 302 aaPredicted RBP14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 MED26O95402 600 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 GSTA1P08263 222 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 GFAPP14136 432 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 CASP2P42575 452 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 MEF2AQ02078 507 aaPredicted RBP14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 LAPTM5Q13571 262 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 NAA30Q147X3 362 aaPredicted RBP14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 TBCCQ15814 346 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 PFKFB4Q16877 469 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 MLIPQ5VWP3 458 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 TMEM214Q6NUQ4 689 aaKnown RBP14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 NIPAL1Q6NVV3 410 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 MREGQ8N565 214 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 NT5CQ8TCD5 201 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 THAP4Q8WY91 577 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 TTC9Q92623 222 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 ESAMQ96AP7 390 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 PTCD3Q96EY7 689 aaKnown RBP14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 RUFY1Q96T51 708 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 EFCAB11Q9BUY7 163 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 DRC3Q9H069 523 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 SPNS1Q9H2V7 528 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 MRPL46Q9H2W6 279 aaKnown RBP14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 SLC22A11Q9NSA0 550 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 GEMIN8Q9NWZ8 242 aaKnown RBP14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 TBK1Q9UHD2 729 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms