RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PLPPR4Q7Z2D5 763 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 VSIG1Q86XK7 387 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 ZNF595Q8IYB9 648 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 LGI2Q8N0V4 545 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 FAM89BQ8N5H3 189 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 JAKMIP2Q96AA8 810 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 VPS33AQ96AX1 596 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 BAG1Q99933 345 aaPredicted RBP2.71□□□□□ -1.98
PTPN4-205ENST00000433888 EQTNQ9NQ60 294 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 PSD3Q9NYI0 1048 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 ZNF581Q9P0T4 197 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 C5AR2Q9P296 337 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.71□□□□□ -1.98
PTPN4-205ENST00000433888 IGHV3-20A0A0C4DH32 117 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 H7C0S8 307 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 UBE2CO00762 179 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 MEIS2O14770 477 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 GJA1P17302 382 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 PSMB10P40306 273 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 HNRNPKP61978 463 aaKnown RBP eCLIP2.7□□□□□ -1.98
PTPN4-205ENST00000433888 FKBP3Q00688 224 aaKnown RBP2.7□□□□□ -1.98
PTPN4-205ENST00000433888 ROR1Q01973 937 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 CALD1Q05682 793 aaKnown RBP2.7□□□□□ -1.98
PTPN4-205ENST00000433888 SRSF9Q13242 221 aaKnown RBP eCLIP2.7□□□□□ -1.98
PTPN4-205ENST00000433888 PRPF4BQ13523 1007 aaKnown RBP2.7□□□□□ -1.98
PTPN4-205ENST00000433888 PHKG1Q16816 387 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 KHDRBS2Q5VWX1 349 aaKnown RBP2.7□□□□□ -1.98
PTPN4-205ENST00000433888 GPR139Q6DWJ6 353 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 BRINP3Q76B58 766 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 GALNTL5Q7Z4T8 443 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 KRT77Q7Z794 578 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 KBTBD6Q86V97 674 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 OR4N5Q8IXE1 308 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 POC5Q8NA72 575 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 OR10Q1Q8NGQ4 319 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 SSC4DQ8WTU2 575 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 NSMAFQ92636 917 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 SLAMF9Q96A28 289 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 SLC22A18Q96BI1 424 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 SPDL1Q96EA4 605 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 GCNAQ96QF7 691 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 OSGEPL1Q9H4B0 414 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 Q9H8V8 135 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 GRPEL1Q9HAV7 217 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 MRPL15Q9P015 296 aaKnown RBP2.7□□□□□ -1.98
PTPN4-205ENST00000433888 WDR35Q9P2L0 1181 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 CFDP1Q9UEE9 299 aaPredicted RBP2.7□□□□□ -1.98
PTPN4-205ENST00000433888 PRDM4Q9UKN5 801 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 ABT1Q9ULW3 272 aaKnown RBP2.7□□□□□ -1.98
PTPN4-205ENST00000433888 PADI2Q9Y2J8 665 aa2.7□□□□□ -1.98
PTPN4-205ENST00000433888 LOC102723996A0A087X1L8 192 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 GPR75-ASB3A0A0A6YYF3 556 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 C2CD4DB7Z1M9 353 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 TRAFD1O14545 582 aaPredicted RBP2.69□□□□□ -1.98
PTPN4-205ENST00000433888 ECE2O60344 883 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 TGDSO95455 350 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 BCL10O95999 233 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 ATP1B1P05026 303 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 PCP11498 1178 aaKnown RBP2.69□□□□□ -1.98
PTPN4-205ENST00000433888 TNNT3P45378 269 aaPredicted RBP2.69□□□□□ -1.98
PTPN4-205ENST00000433888 KHKP50053 298 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 HLCSP50747 726 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 ATP4BP51164 291 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 ALDH3A2P51648 485 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 CDH13P55290 713 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 EPS8Q12929 822 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 PPP2R5CQ13362 524 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 TRIM29Q14134 588 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 PSMD6Q15008 389 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 TMEM211Q6ICI0 200 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 NAA16Q6N069 864 aaPredicted RBP2.69□□□□□ -1.98
PTPN4-205ENST00000433888 NUP54Q7Z3B4 507 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 ANKRD23Q86SG2 305 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 CREBRFQ8IUR6 639 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 GUF1Q8N442 669 aaKnown RBP2.69□□□□□ -1.98
PTPN4-205ENST00000433888 CD177Q8N6Q3 437 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 APPL2Q8NEU8 664 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 RHOXF1Q8NHV9 184 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 MRAPQ8TCY5 172 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 MRPS27Q92552 414 aaKnown RBP2.69□□□□□ -1.98
PTPN4-205ENST00000433888 SYN2Q92777 582 aaPredicted RBP2.69□□□□□ -1.98
PTPN4-205ENST00000433888 THOC1Q96FV9 657 aaKnown RBP2.69□□□□□ -1.98
PTPN4-205ENST00000433888 JAKMIP1Q96N16 626 aaKnown RBP2.69□□□□□ -1.98
PTPN4-205ENST00000433888 ZIM3Q96PE6 472 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 RSPH9Q9H1X1 276 aaPredicted RBP2.69□□□□□ -1.98
PTPN4-205ENST00000433888 OR10A4Q9H209 315 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 ST6GALNAC4Q9H4F1 302 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 OPA3Q9H6K4 179 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 JPT2Q9H910 190 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 DPP3Q9NY33 737 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 CPSF2Q9P2I0 782 aaKnown RBP2.69□□□□□ -1.98
PTPN4-205ENST00000433888 PLCL2Q9UPR0 1127 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 WDR83OSQ9Y284 106 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 TRPV2Q9Y5S1 764 aa2.69□□□□□ -1.98
PTPN4-205ENST00000433888 TRBV4-1A0A0J9YWV2 114 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 hCG_1809904A0A1W2PP81 198 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 A0A1W2PPE2 198 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 A0A1W2PPQ1 181 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 A0A1W2PR64 198 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 TADA2AO75478 443 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms