RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 MLIPQ5VWP3 458 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 SH2D5Q6ZV89 423 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 RPS27LQ71UM5 84 aaKnown RBP13.9□□□□□ -0.18
SGCE-204ENST00000428696 GOLGA7Q7Z5G4 137 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 KLHDC8AQ8IYD2 350 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 KDF1Q8NAX2 398 aaPredicted RBP13.9□□□□□ -0.18
SGCE-204ENST00000428696 MFSD9Q8NBP5 474 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 ARMC2Q8NEN0 867 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 OR4K1Q8NGD4 311 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 SNIP1Q8TAD8 396 aaKnown RBP13.9□□□□□ -0.18
SGCE-204ENST00000428696 SPNS1Q9H2V7 528 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 NOL11Q9H8H0 719 aaKnown RBP13.9□□□□□ -0.18
SGCE-204ENST00000428696 AKIRIN1Q9H9L7 192 aaPredicted RBP13.9□□□□□ -0.18
SGCE-204ENST00000428696 RUVBL1Q9Y265 456 aaKnown RBP13.9□□□□□ -0.18
SGCE-204ENST00000428696 TMEM184BQ9Y519 407 aaPredicted RBP13.9□□□□□ -0.18
SGCE-204ENST00000428696 MAU2Q9Y6X3 613 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 TXNDC9O14530 226 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 KLK8O60259 260 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 PROCP04070 461 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 CAPNS1P04632 268 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 SBK3P0C264 359 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 CREB1P16220 341 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 ITPKBP27987 946 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 DLSTP36957 453 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 CDH13P55290 713 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 SLC18A2Q05940 514 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 ABHD18Q0P651 414 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 PCBP2Q15366 365 aaKnown RBP eCLIP13.9□□□□□ -0.19
SGCE-204ENST00000428696 PAGE2BQ5JRK9 111 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 CFAP157Q5JU67 520 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 ATG9BQ674R7 924 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 TMIGD1Q6UXZ0 262 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 ASPGQ86U10 573 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 TMEM151AQ8N4L1 468 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 BANPQ8N9N5 519 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 CAMKVQ8NCB2 501 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 ZCCHC10Q8TBK6 192 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 UBTD2Q8WUN7 234 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 COL26A1Q96A83 441 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 THAP11Q96EK4 314 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 MOCOSQ96EN8 888 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 PTCD3Q96EY7 689 aaKnown RBP13.9□□□□□ -0.19
SGCE-204ENST00000428696 APOPT1Q96IL0 206 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 NSUN5Q96P11 429 aaKnown RBP13.9□□□□□ -0.19
SGCE-204ENST00000428696 DPH1Q9BZG8 443 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 CHST8Q9H2A9 424 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 SYNPO2LQ9H987 977 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 GPN2Q9H9Y4 310 aaPredicted RBP13.9□□□□□ -0.19
SGCE-204ENST00000428696 SEMA4BQ9NPR2 832 aaPredicted RBP13.9□□□□□ -0.19
SGCE-204ENST00000428696 GEMIN8Q9NWZ8 242 aaKnown RBP13.9□□□□□ -0.19
SGCE-204ENST00000428696 IFT80Q9P2H3 777 aaPredicted RBP13.9□□□□□ -0.19
SGCE-204ENST00000428696 GPN3Q9UHW5 284 aaPredicted RBP13.9□□□□□ -0.19
SGCE-204ENST00000428696 CROTQ9UKG9 612 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 EMCNQ9ULC0 261 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 SRPK3Q9UPE1 567 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 PCDHGA4Q9Y5G9 962 aa13.9□□□□□ -0.19
SGCE-204ENST00000428696 LOC101059948A0A1B0GTJ6 334 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 ANKDD1BA6NHY2 528 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 STX16-NPEPL1H3BU86 382 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 STX16O14662 325 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 P2RX6O15547 441 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 PLIN3O60664 434 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 DLGAP3O95886 979 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 SLC35G6P0C7Q6 338 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 OR1D4P47884 311 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 PIK3CGP48736 1102 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 CCNG1P51959 295 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 DCDP81605 110 aaKnown RBP13.89□□□□□ -0.19
SGCE-204ENST00000428696 RELAQ04206 551 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 SRSF6Q13247 344 aaKnown RBP13.89□□□□□ -0.19
SGCE-204ENST00000428696 DDX39BQ13838 428 aaKnown RBP13.89□□□□□ -0.19
SGCE-204ENST00000428696 NDUFA9Q16795 377 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 ZYG11AQ6WRX3 759 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 HDXQ7Z353 690 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 DTX1Q86Y01 620 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 SLC22A9Q8IVM8 553 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 SPACA3Q8IXA5 215 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 DTWD1Q8N5C7 304 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 KCT2Q8NC54 265 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 TRPC4APQ8TEL6 797 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.89□□□□□ -0.19
SGCE-204ENST00000428696 MTFMTQ96DP5 389 aaKnown RBP13.89□□□□□ -0.19
SGCE-204ENST00000428696 FAM111AQ96PZ2 611 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 CDK15Q96Q40 435 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 SPRY4Q9C004 299 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 STMN4Q9H169 189 aaPredicted RBP13.89□□□□□ -0.19
SGCE-204ENST00000428696 LHX9Q9NQ69 397 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 SLC17A7Q9P2U7 560 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 ACSL6Q9UKU0 697 aa13.89□□□□□ -0.19
SGCE-204ENST00000428696 ACACBO00763 2458 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 SNRNP200O75643 2136 aaKnown RBP13.88□□□□□ -0.19
SGCE-204ENST00000428696 TPRP12270 2363 aaKnown RBP13.88□□□□□ -0.19
SGCE-204ENST00000428696 KCNE1BA0A087WTH5 132 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.88□□□□□ -0.19
SGCE-204ENST00000428696 C9J4A7 227 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 H3BMH7 237 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 E2F3O00716 465 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 PRAMEF4O60810 478 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 SH3BGRLO75368 114 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 LIFP15018 202 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms