RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 NEK10Q6ZWH5 1172 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 ADCK2Q7Z695 626 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 CTAGE6Q86UF2 777 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 CTAGE4Q8IX94 777 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 CTAGE3PQ8IX95 158 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 LRRC56Q8IYG6 542 aaPredicted RBP12.33□□□□□ -0.44
VRK3-203ENST00000424804 AMER3Q8N944 861 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 MNS1Q8NEH6 495 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 KIF18AQ8NI77 898 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 FAM45AQ8TCE6 357 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 FAR1Q8WVX9 515 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 CDKL2Q92772 493 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 THOC3Q96J01 351 aaKnown RBP12.33□□□□□ -0.44
VRK3-203ENST00000424804 OR2A5Q96R48 311 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 LMF1Q96S06 567 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 SLX1AQ9BQ83 275 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 PLCD4Q9BRC7 762 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 DPH7Q9BTV6 452 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 KLHL42Q9P2K6 505 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 ADAMTS6Q9UKP5 1117 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 VWA7Q9Y334 891 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 SCN2AQ99250 2005 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 APCP25054 2843 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 FAM95CA0A1B0GW59 222 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 FFAR3O14843 346 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 EIF3HO15372 352 aaKnown RBP eCLIP12.32□□□□□ -0.44
VRK3-203ENST00000424804 GPR42O15529 346 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 CELA2AP08217 269 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 CMPK1P30085 196 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 SLC26A3P40879 764 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 SLC12A2P55011 1212 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 IL2P60568 153 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 TIAL1Q01085 375 aaKnown RBP eCLIP12.32□□□□□ -0.44
VRK3-203ENST00000424804 MFAP5Q13361 173 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 ZNF169Q14929 603 aaPredicted RBP12.32□□□□□ -0.44
VRK3-203ENST00000424804 HKDC1Q2TB90 917 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 B3GNTL1Q67FW5 361 aaPredicted RBP12.32□□□□□ -0.44
VRK3-203ENST00000424804 LRRC8EQ6NSJ5 796 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 PRMT9Q6P2P2 845 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 ZDHHC24Q6UX98 284 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 ISLR2Q6UXK2 745 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 C3orf62Q6ZUJ4 267 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 TICAM1Q8IUC6 712 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 PRSS58Q8IYP2 241 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 ASB11Q8WXH4 323 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 IFT81Q8WYA0 676 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 SMPDL3AQ92484 453 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 MIEF2Q96C03 454 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 MRRFQ96E11 262 aaKnown RBP12.32□□□□□ -0.44
VRK3-203ENST00000424804 C5orf34Q96MH7 638 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 TAAR6Q96RI8 345 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 OLFM1Q99784 485 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 ZFYVE21Q9BQ24 234 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 CRB3Q9BUF7 120 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 ZNF160Q9HCG1 818 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 SMYD2Q9NRG4 433 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 NSMCE4AQ9NXX6 385 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 TAC3Q9UHF0 121 aa12.32□□□□□ -0.44
VRK3-203ENST00000424804 CORO1CQ9ULV4 474 aaPredicted RBP12.32□□□□□ -0.44
VRK3-203ENST00000424804 RUVBL1Q9Y265 456 aaKnown RBP12.32□□□□□ -0.44
VRK3-203ENST00000424804 LOC102723996A0A087X1L8 192 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 ZNF839A8K0R7 811 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 P2RX6O15547 441 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 WISP2O76076 250 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 SLC16A8O95907 504 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 TUBB4AP04350 444 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 EIF2S1P05198 315 aaKnown RBP12.31□□□□□ -0.44
VRK3-203ENST00000424804 HIST1H2AGP0C0S8 130 aaPredicted RBP12.31□□□□□ -0.44
VRK3-203ENST00000424804 PRR35P0CG20 571 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 EDN3P14138 238 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 HIST1H2ADP20671 130 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 FDXRP22570 491 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 MAGEA4P43358 317 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 TDGF1P3P51864 188 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 FRG1Q14331 258 aaKnown RBP12.31□□□□□ -0.44
VRK3-203ENST00000424804 ZNF460Q14592 562 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 C1QL3Q5VWW1 255 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 MBOAT1Q6ZNC8 495 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 LINC00696Q6ZRV3 163 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 GALNT7Q86SF2 657 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 SLC26A11Q86WA9 606 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 ZC3HC1Q86WB0 502 aaKnown RBP12.31□□□□□ -0.44
VRK3-203ENST00000424804 NOA1Q8NC60 698 aaKnown RBP12.31□□□□□ -0.44
VRK3-203ENST00000424804 MCOLN3Q8TDD5 553 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 ZNF480Q8WV37 535 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 HIST1H2AHQ96KK5 128 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 HIST1H2AJQ99878 128 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 H2AFJQ9BTM1 129 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 TGIF2Q9GZN2 237 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 MRPS30Q9NP92 439 aaKnown RBP12.31□□□□□ -0.44
VRK3-203ENST00000424804 AGPAT4Q9NRZ5 378 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 PLA2G3Q9NZ20 509 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 MOCS1Q9NZB8 636 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 ZNF282Q9UDV7 671 aaPredicted RBP12.31□□□□□ -0.44
VRK3-203ENST00000424804 C3orf18Q9UK00 162 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 MRPS2Q9Y399 296 aaKnown RBP12.31□□□□□ -0.44
VRK3-203ENST00000424804 PCNX1Q96RV3 2341 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 FBN2P35556 2912 aa12.31□□□□□ -0.44
VRK3-203ENST00000424804 SCN3AQ9NY46 2000 aa12.3□□□□□ -0.44
VRK3-203ENST00000424804 IGHV1-45A0A0A0MS14 117 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms