RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 MYL7Q01449 175 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 GUCY2DQ02846 1103 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 SRSF9Q13242 221 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 NONOQ15233 471 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 CDO1Q16878 200 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 SGSM1Q2NKQ1 1148 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 SPOUT1Q5T280 376 aaKnown RBP3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 FAM91A1Q658Y4 838 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 NOTUMQ6P988 496 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 NRARPQ7Z6K4 114 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 HOGA1Q86XE5 327 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 VSIG1Q86XK7 387 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 FAM89BQ8N5H3 189 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 SLC37A3Q8NCC5 494 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 GPRC5AQ8NFJ5 357 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 PIK3R3Q92569 461 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 CDCA3Q99618 268 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 GTPBP2Q9BX10 602 aaKnown RBP3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 CHCHD3Q9NX63 227 aaKnown RBP3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 R4GN57 208 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 MYO5BQ9ULV0 1848 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 CAMSAP1Q5T5Y3 1602 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 GLI2P10070 1586 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 DIP2CQ9Y2E4 1556 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 DUOX2Q9NRD8 1548 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 SNED1Q8TER0 1413 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 IGSF1Q8N6C5 1336 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 A0A087WUV0 522 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 NTN3O00634 580 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 FPGTO14772 594 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 TBCAO75347 108 aaKnown RBP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 HSPA4LO95757 839 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 CGAP01215 116 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 GBAP04062 536 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 ATP1B1P05026 303 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 SPP1P10451 314 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 CD59P13987 128 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 EPORP19235 508 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 HOXC13P31276 330 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 TIA1P31483 386 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 DNA2P51530 1060 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 CAPZA1P52907 286 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 PAX9P55771 341 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 CSNK2BP67870 215 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 IRX1P78414 480 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 TNK1Q13470 666 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 TRIM29Q14134 588 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 OPCMLQ14982 345 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 EFTUD2Q15029 972 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 RBBP7Q16576 425 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 TAZQ16635 292 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 TWISTNBQ3B726 338 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 C14orf177Q52M58 125 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 SPATA19Q7Z5L4 167 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 AMIGO1Q86WK6 493 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 METTL23Q86XA0 190 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 FAM219AQ8IW50 185 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 CCDC60Q8IWA6 550 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 RCOR2Q8IZ40 523 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 KLHDC1Q8N7A1 406 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZNF614Q8N883 585 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 OR7A2PQ8NGA2 310 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 OR2T6Q8NHC8 308 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 SETD6Q8TBK2 473 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 ARHGAP45Q92619 1136 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 NSMAFQ92636 917 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 TSACCQ96A04 125 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 FAM162AQ96A26 154 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 PGM2Q96G03 612 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 POM121L2Q96KW2 1035 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 GDAP1L1Q96MZ0 367 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 FERMT1Q9BQL6 677 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 INPP5KQ9BT40 448 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 CLEC7AQ9BXN2 247 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 GFRA4Q9GZZ7 299 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 ELF5Q9UKW6 265 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 EXOGQ9Y2C4 368 aaKnown RBP3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 PPLO60437 1756 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 PIK3C2BO00750 1634 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 TRPM2O94759 1503 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 EFCAB6Q5THR3 1501 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZMYM4Q5VZL5 1548 aa3.29□□□□□ -1.88
HMGB1P11-201ENST00000413899 A0A1W2PPW3 197 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 C5orf52A6NGY3 159 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 C17orf105B2RV13 164 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZNF195O14628 629 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 WDR46O15213 610 aaKnown RBP3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 EIF5BO60841 1220 aaKnown RBP3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 GAS8-AS1O95177 125 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 MOCS3O95396 460 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 SERPING1P05155 500 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZFYP08048 801 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 PDGFRAP16234 1089 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 CYP2A7P20853 494 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 HLA-FP30511 346 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 SLC6A12P48065 614 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 HLA-BQ31612 363 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 SHEQ5VZ18 495 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 FAAP20Q6NZ36 180 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms