RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TRIM74Q86UV6 250 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 PDCD10Q9BUL8 212 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 OR51V1Q9H2C8 321 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 TTC34A8MYJ7 566 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 E7ESA3 106 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 POU2F1P14859 743 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 WDR5P61964 334 aaKnown RBP16.75■□□□□ 0.27
PHRF1-202ENST00000413872 CEACAM20Q6UY09 585 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 TPT1P8Q9HAU6 139 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 C14orf105Q9NVL8 296 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 KLRF1Q9NZS2 232 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 NCDNQ9UBB6 729 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 MATN2O00339 956 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 TP73O15350 636 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 TPST2O60704 377 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 NELFEP18615 380 aaKnown RBP16.74■□□□□ 0.27
PHRF1-202ENST00000413872 PAX7P23759 505 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 SMARCD3Q6STE5 483 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 PNPLA2Q96AD5 504 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 YIPF4Q9BSR8 244 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 B3GAT2Q9NPZ5 323 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 SLCO3A1Q9UIG8 710 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 CD207Q9UJ71 328 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 TRBC2A0A5B9 178 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 PSMD11O00231 422 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 IL12AP29459 219 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 DSC3Q14574 896 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 ACSBG2Q5FVE4 666 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 ATG14Q6ZNE5 492 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 NRROSQ86YC3 692 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 FAM156AQ8NDB6 213 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 OR4K14Q8NGD5 310 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 TMEM125Q96AQ2 219 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 DSN1Q9H410 356 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 PTGES2Q9H7Z7 377 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 POFUT2Q9Y2G5 429 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 DLGAP4Q9Y2H0 992 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 VSTM5A8MXK1 200 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 BCHEP06276 602 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 TACSTD2P09758 323 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 DRD1P21728 446 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 SEPHS1P49903 392 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 DAG1Q14118 895 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 PCLAFQ15004 111 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 SYT16Q17RD7 645 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 IQCCQ4KMZ1 466 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 C6orf52Q5T4I8 152 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 TMEM135Q86UB9 458 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 LRRC17Q8N6Y2 441 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 OR10H4Q8NGA5 316 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 HAPLN2Q9GZV7 340 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 MCUBQ9NWR8 336 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 MYH1P12882 1939 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 ZNF3P17036 446 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 HNRNPKP61978 463 aaKnown RBP eCLIP16.74■□□□□ 0.27
PHRF1-202ENST00000413872 PTPRCAPQ14761 206 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 CXorf57Q6NSI4 855 aaKnown RBP16.74■□□□□ 0.27
PHRF1-202ENST00000413872 SUSD1Q6UWL2 747 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 USP30Q70CQ3 517 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 ASPGQ86U10 573 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 SLCO6A1Q86UG4 719 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 IQCHQ86VS3 1027 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 C9orf43Q8TAL5 461 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-202ENST00000413872 HSFX1Q9UBD0 423 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 GPR34Q9UPC5 381 aa16.74■□□□□ 0.27
PHRF1-202ENST00000413872 MEIS3P2A8K0S8 358 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 ARPC2O15144 300 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 G6PDP11413 515 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 GNALP38405 381 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 MAPK14Q16539 360 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 TCEAL6Q6IPX3 200 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 FAM131AQ6UXB0 335 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 SLC22A15Q8IZD6 547 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 LGI4Q8N135 537 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 TXNDC5Q8NBS9 432 aaKnown RBP16.73■□□□□ 0.27
PHRF1-202ENST00000413872 OR5AK3PQ8NH89 298 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 ZNF689Q96CS4 500 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-202ENST00000413872 CLCC1Q96S66 551 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 PIGUQ9H490 435 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 KLHL31Q9H511 634 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 REEP4Q9H6H4 257 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 RMI1Q9H9A7 625 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 PDE7BQ9NP56 450 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 NUP98P52948 1817 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 PDCD5O14737 125 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 AOC1P19801 751 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 VIPR2P41587 438 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 CBX5P45973 191 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 XKP51811 444 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 DGKQP52824 942 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 P4HA3Q7Z4N8 544 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 MCM8Q9UJA3 840 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 LOC110117498-PIK3R3F6TDL0 507 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 C6P13671 934 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 RAB25P57735 213 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 DEFB119Q8N690 84 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 OSBPL7Q9BZF2 842 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 ZBTB26Q9HCK0 441 aa16.73■□□□□ 0.27
PHRF1-202ENST00000413872 APOBEC3BQ9UH17 382 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms