RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 ECHDC1Q9NTX5 307 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 FAIMQ9NVQ4 179 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 MCM9Q9NXL9 1143 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CYP39A1Q9NYL5 469 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 C5AR2Q9P296 337 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 LARSQ9P2J5 1176 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 TRIM10Q9UDY6 481 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 IL17BQ9UHF5 180 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 TSPYL4Q9UJ04 414 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 HACL1Q9UJ83 578 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 OSGIN1Q9UJX0 560 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PAIP2BQ9ULR5 123 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 LOXL2Q9Y4K0 774 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 TIMM22Q9Y584 194 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PLEKHG1Q9ULL1 1385 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 TSPOAP1O95153 1857 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 NRKQ7Z2Y5 1582 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 CAMSAP1Q5T5Y3 1602 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 ARHGEF28Q8N1W1 1705 aaKnown RBP2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 TRBC2A0A5B9 178 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 hDV102S1A0JD36 115 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 E9PBE3 544 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 H0YIN7 160 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 SOCS6O14544 535 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF263O14978 683 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 ANKRD28O15084 1053 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 TTI1O43156 1089 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 PLPP2O43688 288 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF217O75362 1048 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 RFPL2O75678 378 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 ATP5HO75947 161 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 GGPS1O95749 300 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 NUDT17P0C025 328 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 IGHV4-30-4P0DP06 118 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 TROVE2P10155 538 aaKnown RBP eCLIP2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 VPREB1P12018 145 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 HRH2P25021 359 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 MARK3P27448 753 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 SSTR2P30874 369 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 CCT6AP40227 531 aaKnown RBP2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 VHLP40337 213 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF41P51814 821 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 TAS2R38P59533 333 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 RPL26P61254 145 aaKnown RBP2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 CTAG1AP78358 180 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 GAGE2BQ13066 116 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 CUL1Q13616 776 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 KRT33BQ14525 404 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 IL11RAQ14626 422 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 STK38Q15208 465 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 KRT31Q15323 416 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 OASLQ15646 514 aaKnown RBP2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 CCDC152Q4G0S7 254 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 GAGE2EQ4V326 116 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 ATP13A5Q4VNC0 1218 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 LIN52Q52LA3 116 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 CCDC122Q5T0U0 273 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZC2HC1BQ5TFG8 222 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZDHHC20Q5W0Z9 365 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 CST9LP1Q5W188 147 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 C18orf63Q68DL7 685 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 FAM109BQ6ICB4 259 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 GAGE2AQ6NT46 116 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 TMEM53Q6P2H8 277 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 FAM122CQ6P4D5 195 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 KLC3Q6P597 504 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 DHRS4L2Q6PKH6 230 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 RBPMS2Q6ZRY4 209 aaKnown RBP2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 STOX1Q6ZVD7 989 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 OTUD6AQ7L8S5 288 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 SLFN11Q7Z7L1 901 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF589Q86UQ0 364 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 ADIPOR2Q86V24 386 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 VSIG1Q86XK7 387 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 LRRC49Q8IUZ0 686 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 CEP97Q8IW35 865 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 NELFCDQ8IXH7 590 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 LRRC34Q8IZ02 419 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 BBS5Q8N3I7 341 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 RASGEF1CQ8N431 466 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 GCSAMQ8N6F7 178 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 DQX1Q8TE96 717 aaKnown RBP2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 NAT14Q8WUY8 206 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 IFT81Q8WYA0 676 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 IFT74Q96LB3 600 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 TCEANC2Q96MN5 208 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 F2RL3Q96RI0 385 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 SLC22A12Q96S37 553 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 RUFY1Q96T51 708 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 NAP1L3Q99457 506 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 DDOQ99489 341 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 GFI1Q99684 422 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 SEMA3CQ99985 751 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 HGH1Q9BTY7 390 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 GPR88Q9GZN0 384 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 CARD9Q9H257 536 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 RAD21L1Q9H4I0 556 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 DCLRE1BQ9H816 532 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 POLD4Q9HCU8 107 aa2.32□□□□□ -2.04
HMGB3P2-201ENST00000411913 CHMP1AQ9HD42 196 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms