RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 AHRP35869 848 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 SLC19A1P41440 591 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 NEK2P51955 445 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 UFM1P61960 85 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 SHC2P98077 582 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 HMGCS1Q01581 520 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 RPL6Q02878 288 aaKnown RBP9.42□□□□□ -0.9
POLR1A-202ENST00000409024 CSTF1Q05048 431 aaKnown RBP9.42□□□□□ -0.9
POLR1A-202ENST00000409024 SRSF11Q05519 484 aaKnown RBP9.42□□□□□ -0.9
POLR1A-202ENST00000409024 ACSM2AQ08AH3 577 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 NUMA1Q14980 2115 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 ELOCQ15369 112 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 CATSPEREQ5SY80 951 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 ACSM2BQ68CK6 577 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 NOXRED1Q6NXP6 359 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 SUSD1Q6UWL2 747 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 SLC9B2Q86UD5 537 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 WDR5BQ86VZ2 330 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 GKN2Q86XP6 184 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 LIX1Q8N485 282 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 NATD1Q8N6N6 113 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 LMNTD1Q8N9Z9 388 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 LINC01555Q8NAE3 123 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 OR2A1Q8NGT9 310 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 HUS1BQ8NHY5 278 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 LCN9Q8WX39 176 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 RLN3Q8WXF3 142 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 SNX19Q92543 992 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 JADE3Q92613 823 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 MTFMTQ96DP5 389 aaKnown RBP9.42□□□□□ -0.9
POLR1A-202ENST00000409024 QRFPRQ96P65 431 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 IL17FQ96PD4 163 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 GPATCH1Q9BRR8 931 aaKnown RBP9.42□□□□□ -0.9
POLR1A-202ENST00000409024 CENPKQ9BS16 269 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 C1orf50Q9BV19 199 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 CLMPQ9H6B4 373 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 ERVMER34-1Q9H9K5 563 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 UCK1Q9HA47 277 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 SPAG4Q9NPE6 437 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 DMRT3Q9NQL9 472 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 ZSCAN32Q9NX65 697 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
POLR1A-202ENST00000409024 TAAR2Q9P1P5 351 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 ZNF624Q9P2J8 865 aaPredicted RBP9.42□□□□□ -0.9
POLR1A-202ENST00000409024 GIMAP2Q9UG22 337 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 TAC3Q9UHF0 121 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 ICKQ9UPZ9 632 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 KLK4Q9Y5K2 254 aa9.42□□□□□ -0.9
POLR1A-202ENST00000409024 CFAP20Q9Y6A4 193 aaKnown RBP9.42□□□□□ -0.9
POLR1A-202ENST00000409024 ANKRD12Q6UB98 2062 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.41□□□□□ -0.9
POLR1A-202ENST00000409024 KRT87PA6NCN2 255 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 OR52A4PA6NMU1 304 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 MAGEB17A8MXT2 336 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 NR5A2O00482 541 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 TRIM38O00635 465 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 CLEC3AO75596 197 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 VIPP01282 170 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 PCNAP12004 261 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 AK4P27144 223 aaPredicted RBP9.41□□□□□ -0.9
POLR1A-202ENST00000409024 ZFP36L2P47974 494 aaKnown RBP9.41□□□□□ -0.9
POLR1A-202ENST00000409024 PSME3P61289 254 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 HNRNPKP61978 463 aaKnown RBP eCLIP9.41□□□□□ -0.9
POLR1A-202ENST00000409024 UBE2IP63279 158 aaKnown RBP9.41□□□□□ -0.9
POLR1A-202ENST00000409024 TRAP1Q12931 704 aaKnown RBP9.41□□□□□ -0.9
POLR1A-202ENST00000409024 TSTA3Q13630 321 aaPredicted RBP9.41□□□□□ -0.9
POLR1A-202ENST00000409024 TLR1Q15399 786 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 TMEM35AQ53FP2 167 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 PIGGQ5H8A4 983 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 SAMD4BQ5PRF9 694 aaKnown RBP9.41□□□□□ -0.9
POLR1A-202ENST00000409024 AAGABQ6PD74 315 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 SLC30A9Q6PML9 568 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 PAGE2Q7Z2X7 111 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 CAMKMTQ7Z624 323 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 TAF8Q7Z7C8 310 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 TRIM48Q8IWZ4 208 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 METTL4Q8N3J2 472 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 ZBTB44Q8NCP5 570 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 TRPV3Q8NET8 790 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 OR9I1Q8NGQ6 314 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 FBXO27Q8NI29 283 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 C1orf216Q8TAB5 229 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 MTERF3Q96E29 417 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 THAP11Q96EK4 314 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 APIPQ96GX9 242 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 SLC6A18Q96N87 628 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 TMEM74Q96NL1 305 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 PRPF18Q99633 342 aaKnown RBP9.41□□□□□ -0.9
POLR1A-202ENST00000409024 NPAS2Q99743 824 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 SH3GL1Q99961 368 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 MUC13Q9H3R2 512 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 ACTL8Q9H568 366 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 RMND5AQ9H871 391 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 MRPS30Q9NP92 439 aaKnown RBP9.41□□□□□ -0.9
POLR1A-202ENST00000409024 PARD6AQ9NPB6 346 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 PRMT8Q9NR22 394 aaPredicted RBP9.41□□□□□ -0.9
POLR1A-202ENST00000409024 TMEM181Q9P2C4 612 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 MAP10Q9P2G4 905 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 SPASTQ9UBP0 616 aa9.41□□□□□ -0.9
POLR1A-202ENST00000409024 APOBEC3BQ9UH17 382 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms