RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ADNP2Q6IQ32 1131 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 MED27Q6P2C8 311 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 OR4N4Q8N0Y3 316 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 TBC1D19Q8N5T2 526 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 N4BP2L2Q92802 583 aaPredicted RBP31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 LIN37Q96GY3 246 aaPredicted RBP31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 AKAP7Q9P0M2 348 aaPredicted RBP31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 PLCL2Q9UPR0 1127 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 SPTBP11277 2137 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 KLF11O14901 512 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 CCL4P13236 92 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 GUCY1A3Q02108 690 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 RAB11FIP2Q7L804 512 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 CACTIN-AS1Q8N1I8 211 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 GALNT15Q8N3T1 639 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 MFSD9Q8NBP5 474 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 OR7G3Q8NG95 312 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 METTL6Q8TCB7 284 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 AGR3Q8TD06 166 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 MAGEB18Q96M61 343 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 OR6C1Q96RD1 312 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 SORT1Q99523 831 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 PITHD1Q9GZP4 211 aaPredicted RBP31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 NT5DC2Q9H857 520 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 FGF21Q9NSA1 209 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 LOXL2Q9Y4K0 774 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 TIMM22Q9Y584 194 aa31.84■■■□□ 2.69
CSNK1E-204ENST00000403904 H0YIV9 168 aa31.83■■■□□ 2.69
CSNK1E-204ENST00000403904 HYAL3O43820 417 aaPredicted RBP31.83■■■□□ 2.69
CSNK1E-204ENST00000403904 SNNO75324 88 aaPredicted RBP31.83■■■□□ 2.69
CSNK1E-204ENST00000403904 STATHP02808 62 aa31.83■■■□□ 2.69
CSNK1E-204ENST00000403904 FOXM1Q08050 763 aa31.83■■■□□ 2.69
CSNK1E-204ENST00000403904 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP31.83■■■□□ 2.69
CSNK1E-204ENST00000403904 LAS2Q8IYD9 372 aa31.83■■■□□ 2.69
CSNK1E-204ENST00000403904 MAGEB10Q96LZ2 347 aaPredicted RBP31.83■■■□□ 2.69
CSNK1E-204ENST00000403904 THAP1Q9NVV9 213 aa31.83■■■□□ 2.69
CSNK1E-204ENST00000403904 PCDHGA11Q9Y5H2 935 aa31.83■■■□□ 2.69
CSNK1E-204ENST00000403904 TMEM150CB9EJG8 249 aa31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 H0YGG7 62 aa31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 PCNAP12004 261 aa31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 VSX2P58304 361 aaPredicted RBP31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 ARF3P61204 181 aaPredicted RBP31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 CYP4F2P78329 520 aa31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 TUBB3Q13509 450 aa31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 TCHHL1Q5QJ38 904 aaPredicted RBP31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 TTC19Q6DKK2 380 aaPredicted RBP31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 TMPRSS7Q7RTY8 843 aa31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 UBE2E3Q969T4 207 aa31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 ZDHHC2Q9UIJ5 367 aa31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 ZFP69BQ9UJL9 534 aa31.82■■■□□ 2.68
CSNK1E-204ENST00000403904 CRCPO75575 148 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 EIF2S1P05198 315 aaKnown RBP31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 ENO1P06733 434 aaKnown RBP31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 MSL3P1P0C860 447 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 ACY1Q03154 408 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 SH2D4BQ5SQS7 431 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 CLEC6AQ6EIG7 209 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 VN1R4Q7Z5H5 301 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 BMPERQ8N8U9 685 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 RERGQ96A58 199 aaPredicted RBP31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 ZNF501Q96CX3 271 aaPredicted RBP31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 MTFMTQ96DP5 389 aaKnown RBP31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 MACROD1Q9BQ69 325 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 FIS1Q9Y3D6 152 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 CCDC187A0A096LP49 1063 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 A0A1W2PNU3 283 aaPredicted RBP31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 SERPINB3P29508 390 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 HMOX2P30519 316 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 HOXD11P31277 338 aaPredicted RBP31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 AHRP35869 848 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 NEK2P51955 445 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 GYS2P54840 703 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 ZNF781Q8N8C0 355 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 THAP11Q96EK4 314 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 PRM3Q9NNZ6 103 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 STARD5Q9NSY2 213 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 AP1M2Q9Y6Q5 423 aa31.81■■■□□ 2.68
CSNK1E-204ENST00000403904 SPTBN2O15020 2390 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 PMS2P1A4D2B8 440 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 ANKDD1BA6NHY2 528 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 TMEM233B4DJY2 109 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 AZIN1O14977 448 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 SRPX2O60687 465 aaPredicted RBP31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 SERPIND1P05546 499 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 ITIH1P19827 911 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 MDH1P40925 334 aaKnown RBP31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 ID4P47928 161 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 DDX39BQ13838 428 aaKnown RBP31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 FRG2Q64ET8 278 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 VN1R5Q7Z5H4 357 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 RNF175Q8N4F7 328 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 OR1L3Q8NH93 324 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 WDR20Q8TBZ3 569 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 REPS1Q96D71 796 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 FRG2BQ96QU4 278 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 SLC29A3Q9BZD2 475 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 ILKAPQ9H0C8 392 aaPredicted RBP31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 RHBGQ9H310 441 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 FANCEQ9HB96 536 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 FARSBQ9NSD9 589 aaKnown RBP31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms