RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 KLF7O75840 302 aaPredicted RBP13.1□□□□□ -0.31
SEC13-205ENST00000397101 S100BP04271 92 aaPredicted RBP13.1□□□□□ -0.31
SEC13-205ENST00000397101 RBP1P09455 135 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 NEFHP12036 1026 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 EDN3P14138 238 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 CD1DP15813 335 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 AGXTP21549 392 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 PDHA2P29803 388 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 CRHR1P34998 444 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 DLG1Q12959 904 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 ACAP2Q15057 778 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 KRTAP21-3Q3LHN1 58 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 PRAMEF17Q5VTA0 474 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 HHATQ5VTY9 493 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 SP5Q6BEB4 398 aaPredicted RBP13.1□□□□□ -0.31
SEC13-205ENST00000397101 ARMC6Q6NXE6 501 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 TTC23LQ6PF05 361 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 UBE2R2Q712K3 238 aaPredicted RBP13.1□□□□□ -0.31
SEC13-205ENST00000397101 CUZD1Q86UP6 607 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 LCA5Q86VQ0 697 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 ZADH2Q8N4Q0 377 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 TCP10LQ8TDR4 215 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 NACC2Q96BF6 587 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 UBXN10Q96LJ8 280 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 TRIM54Q9BYV2 358 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 ALG9Q9H6U8 611 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 KIR3DX1Q9H7L2 352 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 SSU72Q9NP77 194 aaKnown RBP13.1□□□□□ -0.31
SEC13-205ENST00000397101 SOHLH2Q9NX45 425 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 TMEM216Q9P0N5 145 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 POMT2Q9UKY4 750 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 NTNG1Q9Y2I2 539 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 PDZD2O15018 2839 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 TMEM120BA0PK00 339 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 ARHGAP10A1A4S6 786 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 CDC7O00311 574 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 E2F3O00716 465 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 ZBTB14O43829 449 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 SLCO2B1O94956 709 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 ZWINTO95229 277 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 CATP04040 527 aaKnown RBP13.09□□□□□ -0.31
SEC13-205ENST00000397101 C8GP07360 202 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 HIST1H2AGP0C0S8 130 aaPredicted RBP13.09□□□□□ -0.31
SEC13-205ENST00000397101 TAC1P20366 129 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 HIST1H2ADP20671 130 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 CYP2A7P20853 494 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 NDUFS1P28331 727 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 RPA3P35244 121 aaPredicted RBP13.09□□□□□ -0.31
SEC13-205ENST00000397101 PPP2R2AP63151 447 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 PRKAA1Q13131 559 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 RAPSNQ13702 412 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 TSNQ15631 228 aaKnown RBP13.09□□□□□ -0.31
SEC13-205ENST00000397101 CCDC153Q494R4 210 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 FAM69BQ5VUD6 431 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 SH2D5Q6ZV89 423 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 NEK10Q6ZWH5 1172 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 TAX1BP1Q86VP1 789 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 MCEMP1Q8IX19 187 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 SLC22A15Q8IZD6 547 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 CENPLQ8N0S6 344 aaPredicted RBP13.09□□□□□ -0.31
SEC13-205ENST00000397101 ARFGAP2Q8N6H7 521 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 OR1L3Q8NH93 324 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 STAG3L4Q8TBR4 150 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 PPP4R1Q8TF05 950 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 PCSK5Q92824 1860 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 PDLIM5Q96HC4 596 aaKnown RBP13.09□□□□□ -0.31
SEC13-205ENST00000397101 HIST1H2AHQ96KK5 128 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 C12orf66Q96MD2 445 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 FAM111AQ96PZ2 611 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 FERD3LQ96RJ6 166 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 HIST1H2AJQ99878 128 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 H2AFJQ9BTM1 129 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 C12orf65Q9H3J6 166 aaKnown RBP13.09□□□□□ -0.31
SEC13-205ENST00000397101 TFB2MQ9H5Q4 396 aaKnown RBP13.09□□□□□ -0.31
SEC13-205ENST00000397101 IMP3Q9NV31 184 aaKnown RBP13.09□□□□□ -0.31
SEC13-205ENST00000397101 MKS1Q9NXB0 559 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 CPSF2Q9P2I0 782 aaKnown RBP13.09□□□□□ -0.31
SEC13-205ENST00000397101 MID2Q9UJV3 735 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 SERTAD3Q9UJW9 196 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 ASF1AQ9Y294 204 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 F8P00451 2351 aa13.09□□□□□ -0.31
SEC13-205ENST00000397101 DIDO1Q9BTC0 2240 aaKnown RBP13.08□□□□□ -0.32
SEC13-205ENST00000397101 A0A1B0GUH1 482 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 OR6C74A6NCV1 312 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 SLC9B1P1A6NJY1 282 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 SYCE1LA8MT33 242 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 SUPT3HB4E1H0 165 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 TMEM150CB9EJG8 249 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 E7EQ34 232 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 PEX12O00623 359 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 PRPF4O43172 522 aaKnown RBP eCLIP13.08□□□□□ -0.32
SEC13-205ENST00000397101 SMIM24O75264 130 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 SUPT3HO75486 399 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 WISP3O95389 354 aaPredicted RBP13.08□□□□□ -0.32
SEC13-205ENST00000397101 RPN2P04844 631 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 STSP08842 583 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 CDH3P22223 829 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 TSFMP43897 325 aaKnown RBP13.08□□□□□ -0.32
SEC13-205ENST00000397101 IGFL2Q6UWQ7 119 aa13.08□□□□□ -0.32
SEC13-205ENST00000397101 CYHR1Q6ZMK1 362 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms