RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 STC1P52823 247 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ARSFP54793 590 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 PTPN5P54829 565 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 DEFA5Q01523 94 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 LRIT3Q3SXY7 679 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 LRRC73Q5JTD7 316 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 LCN1P1Q5VSP4 162 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 OTUD1Q5VV17 481 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 SZRD1Q7Z422 152 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 PHYKPLQ8IUZ5 450 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 SLC38A6Q8IZM9 456 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 RHOXF1Q8NHV9 184 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ZNF431Q8TF32 576 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 SELENOMQ8WWX9 145 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 HERVK_113Q902F9 699 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 BIRC7Q96CA5 298 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 REPS1Q96D71 796 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ZNF778Q96MU6 729 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TRIM8Q9BZR9 551 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 MUC13Q9H3R2 512 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 FANCFQ9NPI8 374 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TIGARQ9NQ88 270 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 AHSPQ9NZD4 102 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 NUDT4Q9NZJ9 180 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ENPP5Q9UJA9 477 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 EP400Q96L91 3159 aa5.52□□□□□ -1.52
RFFL-202ENST00000394597 PRAMEF33A0A0G2JMD5 474 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 ZCWPW2A0A1B0GU75 182 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 MGAT4DA6NG13 374 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 HEPACAM2A8MVW5 462 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 UPK3BL1B0FP48 263 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 UPK3BL2E5RIL1 263 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 H0YAE9 185 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 K7ERQ8 282 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PRAMEF10O60809 474 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 KCNA5P22460 613 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 STK19P49842 368 aaPredicted RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 ALDH3A2P51648 485 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 MXD1Q05195 221 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 GRSF1Q12849 480 aaKnown RBP eCLIP5.52□□□□□ -1.53
RFFL-202ENST00000394597 TSNQ15631 228 aaKnown RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 WSCD2Q2TBF2 565 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 HSD17B12Q53GQ0 312 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 RNF111Q6ZNA4 994 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 IDO2Q6ZQW0 420 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 MTSS1LQ765P7 747 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SPATC1Q76KD6 591 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 TMEM102Q8N9M5 508 aaPredicted RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 PSD4Q8NDX1 1056 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 OR6Q1Q8NGQ2 317 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 OR9I1Q8NGQ6 314 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 NDNFQ8TB73 568 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PPM1MQ96MI6 270 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 LINC00597Q9H2U6 94 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 REEP1Q9H902 201 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 NANOGQ9H9S0 305 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 AMBNQ9NP70 447 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PHPT1Q9NRX4 125 aaPredicted RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 ERVK13-1Q9NX77 482 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SLCO3A1Q9UIG8 710 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 CFL2Q9Y281 166 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 INVSQ9Y283 1065 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PCDHB3Q9Y5E6 796 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SCN1AP35498 2009 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 TRIP12Q14669 1992 aaPredicted RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 IGLV3-10A0A075B6K4 115 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 LINC01553A4QN01 128 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PRORSD1PA6NEY8 169 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 FABP12A6NFH5 140 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 GRXCR1A8MXD5 290 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 TMEM233B4DJY2 109 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 UBXN8O00124 270 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 CACNB4O00305 520 aaPredicted RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 SLC28A1O00337 649 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 HOXC11O43248 304 aaPredicted RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 NIPSNAP2O75323 286 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PLATP00750 562 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 ZDHHC11BP0C7U3 371 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 C7P10643 843 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 M6PRP20645 277 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 HNF1BP35680 557 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 VIPR2P41587 438 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 MAP2K4P45985 399 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 RPIAP49247 311 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PGFP49763 221 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SEC13P55735 322 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PWP1Q13610 501 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SELPLGQ14242 412 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 TIGD6Q17RP2 521 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 ESCO2Q56NI9 601 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 LRRC66Q68CR7 880 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 TMEM220Q6QAJ8 160 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 CHMP1BQ7LBR1 199 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 OOSP2Q86WS3 158 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 ZNF366Q8N895 744 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PJA1Q8NG27 643 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 OR13F1Q8NGS4 319 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 OR14C36Q8NHC7 312 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 MTFMTQ96DP5 389 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms