RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CTAGE8P0CG41 777 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 CCDC166P0CW27 439 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 CASRP41180 1078 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 VWA2Q5GFL6 755 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 CTAGE6Q86UF2 777 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 THOC6Q86W42 341 aaKnown RBP29.22■■■□□ 2.27
CMTM4-202ENST00000394106 CTAGE4Q8IX94 777 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 ABHD11Q8NFV4 315 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 TRIM44Q96DX7 344 aaPredicted RBP29.22■■■□□ 2.27
CMTM4-202ENST00000394106 EPN3Q9H201 632 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 SEMA3GQ9NS98 782 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 FBXL4Q9UKA2 621 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 DYRK1BQ9Y463 629 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 HS3ST3B1Q9Y662 390 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 NUP210LQ5VU65 1888 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 SOCS6O14544 535 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 SNRPNP63162 240 aaKnown RBP29.21■■■□□ 2.27
CMTM4-202ENST00000394106 CDKL1Q00532 357 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 TLE1Q04724 770 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 CSHL1Q14406 222 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 SLMAPQ14BN4 828 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 CATSPEREQ5SY80 951 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 ASPGQ86U10 573 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 AMER3Q8N944 861 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 MFSD9Q8NBP5 474 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 CAMKVQ8NCB2 501 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 SLC5A11Q8WWX8 675 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 NEIL2Q969S2 332 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 NACC2Q96BF6 587 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 DMGDHQ9UI17 866 aaKnown RBP29.21■■■□□ 2.27
CMTM4-202ENST00000394106 ZNF451Q9Y4E5 1061 aa29.21■■■□□ 2.27
CMTM4-202ENST00000394106 NCF1BA6NI72 391 aaPredicted RBP29.2■■■□□ 2.26
CMTM4-202ENST00000394106 NCF1CA8MVU1 366 aaPredicted RBP29.2■■■□□ 2.26
CMTM4-202ENST00000394106 OR1F1O43749 312 aa29.2■■■□□ 2.26
CMTM4-202ENST00000394106 NCF1P14598 390 aaPredicted RBP29.2■■■□□ 2.26
CMTM4-202ENST00000394106 SLC26A3P40879 764 aa29.2■■■□□ 2.26
CMTM4-202ENST00000394106 AVPR1BP47901 424 aa29.2■■■□□ 2.26
CMTM4-202ENST00000394106 RAB10P61026 200 aa29.2■■■□□ 2.26
CMTM4-202ENST00000394106 NAB1Q13506 487 aa29.2■■■□□ 2.26
CMTM4-202ENST00000394106 FAM53BQ14153 422 aa29.2■■■□□ 2.26
CMTM4-202ENST00000394106 OR9A4Q8NGU2 314 aa29.2■■■□□ 2.26
CMTM4-202ENST00000394106 ZCCHC10Q8TBK6 192 aa29.2■■■□□ 2.26
CMTM4-202ENST00000394106 SLC13A3Q8WWT9 602 aa29.2■■■□□ 2.26
CMTM4-202ENST00000394106 MTRF1LQ9UGC7 380 aaKnown RBP29.2■■■□□ 2.26
CMTM4-202ENST00000394106 C3orf18Q9UK00 162 aa29.2■■■□□ 2.26
CMTM4-202ENST00000394106 SLC22A14Q9Y267 594 aa29.2■■■□□ 2.26
CMTM4-202ENST00000394106 ALOX12BO75342 701 aa29.19■■■□□ 2.26
CMTM4-202ENST00000394106 MAT1AQ00266 395 aaKnown RBP29.19■■■□□ 2.26
CMTM4-202ENST00000394106 ZKSCAN8Q15776 578 aaPredicted RBP29.19■■■□□ 2.26
CMTM4-202ENST00000394106 SYT16Q17RD7 645 aa29.19■■■□□ 2.26
CMTM4-202ENST00000394106 C18orf21Q32NC0 220 aaPredicted RBP29.19■■■□□ 2.26
CMTM4-202ENST00000394106 KIRREL2Q6UWL6 708 aa29.19■■■□□ 2.26
CMTM4-202ENST00000394106 GALNT16Q8N428 558 aa29.19■■■□□ 2.26
CMTM4-202ENST00000394106 OR4K1Q8NGD4 311 aa29.19■■■□□ 2.26
CMTM4-202ENST00000394106 KIF18AQ8NI77 898 aa29.19■■■□□ 2.26
CMTM4-202ENST00000394106 IFT81Q8WYA0 676 aa29.19■■■□□ 2.26
CMTM4-202ENST00000394106 TM4SF19Q96DZ7 209 aa29.19■■■□□ 2.26
CMTM4-202ENST00000394106 MRRFQ96E11 262 aaKnown RBP29.19■■■□□ 2.26
CMTM4-202ENST00000394106 ATP13A2Q9NQ11 1180 aa29.19■■■□□ 2.26
CMTM4-202ENST00000394106 IGLV3-12A0A075B6K2 115 aa29.18■■■□□ 2.26
CMTM4-202ENST00000394106 CD1DP15813 335 aa29.18■■■□□ 2.26
CMTM4-202ENST00000394106 HNMTP50135 292 aa29.18■■■□□ 2.26
CMTM4-202ENST00000394106 TMEM214Q6NUQ4 689 aaKnown RBP29.18■■■□□ 2.26
CMTM4-202ENST00000394106 RAPH1Q70E73 1250 aa29.18■■■□□ 2.26
CMTM4-202ENST00000394106 PRSS41Q7RTY9 318 aa29.18■■■□□ 2.26
CMTM4-202ENST00000394106 LAPTM4BQ86VI4 370 aa29.18■■■□□ 2.26
CMTM4-202ENST00000394106 TBC1D19Q8N5T2 526 aa29.18■■■□□ 2.26
CMTM4-202ENST00000394106 KCT2Q8NC54 265 aa29.18■■■□□ 2.26
CMTM4-202ENST00000394106 MKKSQ9NPJ1 570 aaPredicted RBP29.18■■■□□ 2.26
CMTM4-202ENST00000394106 MAP4K5Q9Y4K4 846 aa29.18■■■□□ 2.26
CMTM4-202ENST00000394106 HELZ2Q9BYK8 2649 aaKnown RBP29.18■■■□□ 2.26
CMTM4-202ENST00000394106 TRBC2A0A5B9 178 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 WDR47O94967 919 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 SLC35G6P0C7Q6 338 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 IL1RNP18510 177 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 GMPRP36959 345 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 ATP6V0D1P61421 351 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 TGFBIQ15582 683 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 TUBB8Q3ZCM7 444 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 CMC1Q7Z7K0 106 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 TMPRSS11BQ86T26 416 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 GPSM1Q86YR5 675 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 ZNF740Q8NDX6 193 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 RHBDF1Q96CC6 855 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 MESP1Q9BRJ9 268 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 FAM129AQ9BZQ8 928 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 SPNS1Q9H2V7 528 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 C14orf105Q9NVL8 296 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 NINJ2Q9NZG7 142 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 PCDHGB7Q9Y5F8 929 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 KCNE2Q9Y6J6 123 aa29.17■■■□□ 2.26
CMTM4-202ENST00000394106 NDUFS4O43181 175 aa29.16■■■□□ 2.26
CMTM4-202ENST00000394106 SERPIND1P05546 499 aa29.16■■■□□ 2.26
CMTM4-202ENST00000394106 GDF5P43026 501 aa29.16■■■□□ 2.26
CMTM4-202ENST00000394106 EMP2P54851 167 aa29.16■■■□□ 2.26
CMTM4-202ENST00000394106 AIMP2Q13155 320 aaKnown RBP29.16■■■□□ 2.26
CMTM4-202ENST00000394106 OR4D1Q15615 310 aa29.16■■■□□ 2.26
CMTM4-202ENST00000394106 CEP128Q6ZU80 1094 aa29.16■■■□□ 2.26
CMTM4-202ENST00000394106 VPS50Q96JG6 964 aa29.16■■■□□ 2.26
CMTM4-202ENST00000394106 PELI2Q9HAT8 420 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms