RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SLC1A2P43004 574 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 EXOC3L2Q2M3D2 409 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 SLC22A10Q63ZE4 541 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 DUS1LQ6P1R4 473 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 DOK3Q7L591 496 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 NUDT10Q8NFP7 164 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PROKR1Q8TCW9 393 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 SCARB1Q8WTV0 552 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 RAD54LQ92698 747 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 GGHQ92820 318 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 IGSF8Q969P0 613 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ZNF775Q96BV0 537 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 NUDT11Q96G61 164 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 CCDC17Q96LX7 622 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 DHX33Q9H6R0 707 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 MRPL40Q9NQ50 206 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 WARS2Q9UGM6 360 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 PLAGL2Q9UPG8 496 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ERVK-19Q9WJR5 959 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ABCC2Q92887 1545 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 SOGA1O94964 1423 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 EVC2Q86UK5 1308 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 IFT172Q9UG01 1749 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 MAP3K4Q9Y6R4 1608 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 DUXAA6NLW8 204 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ZNF716A6NP11 495 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 MCIDASD6RGH6 385 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ZW10O43264 779 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 GNA14O95837 355 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 CYP3A4P08684 503 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ZNF735P0CB33 412 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ZCCHC18P0CG32 403 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 HPGDP15428 266 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 CYP2B6P20813 491 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 HTR7P34969 479 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 SPAM1P38567 509 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 MAPKAPK2P49137 400 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 CCT8P50990 548 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PLTPP55058 493 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 RPS18P62269 152 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 ILF2Q12905 390 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 STX5Q13190 355 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 C6orf141Q5SZD1 244 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 AADACL2Q6P093 401 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PPP1R32Q7Z5V6 425 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ADGRF3Q8IZF5 1079 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 FUKQ8N0W3 1084 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 CERS5Q8N5B7 392 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ICA1LQ8NDH6 482 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 MCPH1Q8NEM0 835 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ENGASEQ8NFI3 743 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 BEST2Q8NFU1 509 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 GOLGA5Q8TBA6 731 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PIH1D2Q8WWB5 315 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 LPPQ93052 612 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PPP1R16AQ96I34 528 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 C4orf36Q96KX1 117 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 GFM1Q96RP9 751 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 KLC2Q9H0B6 622 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 UBE2TQ9NPD8 197 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 ACSS1Q9NUB1 689 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 TMEM248Q9NWD8 314 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 BARHL2Q9NY43 387 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 DNAJB4Q9UDY4 337 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 NOSIPQ9Y314 301 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 MARF1Q9Y4F3 1742 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 HYKKA2RU49 373 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 UNC119BA6NIH7 251 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 CDRT15L2A8MXV6 281 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PRSS46E5RG02 174 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PLSCR1O15162 318 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ZNF189O75820 626 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 NPSP0C0P6 89 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PET100P0DJ07 73 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 HNRNPH3P31942 346 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 SFTPDP35247 375 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 MYL6P60660 151 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 HERV-K104P63124 156 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 GPC5P78333 572 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 MRPS34P82930 218 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 CNTN2Q02246 1040 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 RBBP7Q16576 425 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 FAM83EQ2M2I3 478 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 TIGD5Q53EQ6 642 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 BEND6Q5SZJ8 279 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 DDI2Q5TDH0 399 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 TTC23Q5W5X9 447 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 PLEKHA7Q6IQ23 1121 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 C11orf63Q6NUN7 778 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 C1orf186Q6ZWK4 172 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 Q71RC1 249 aaPredicted RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 CD302Q8IX05 232 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 GCNT2Q8N0V5 402 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 ANKFN1Q8N957 763 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 FADS6Q8N9I5 356 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 OR4C15Q8NGM1 316 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 SLC16A10Q8TF71 515 aa3.41□□□□□ -1.86
XRN1-202ENST00000392981 SMG7Q92540 1137 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 LARP4BQ92615 738 aaKnown RBP3.41□□□□□ -1.86
XRN1-202ENST00000392981 CELF1Q92879 486 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms