RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SMC6Q96SB8 1091 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 NDC1Q9BTX1 674 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 C12orf65Q9H3J6 166 aaKnown RBP17.89■□□□□ 0.45
SSU72-203ENST00000378725 IRAK4Q9NWZ3 460 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 PCTPQ9UKL6 214 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 PADI1Q9ULC6 663 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 ANKRD12Q6UB98 2062 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 A0A087WV48 116 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 HYKKA2RU49 373 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 MEN1O00255 615 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 TYROBPO43914 113 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 KATNA1O75449 491 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 CCNYL3P0C7X3 344 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 CD22P20273 847 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 IMPDH1P20839 514 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 AHRP35869 848 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 HERVK_113P63132 956 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 IRF8Q02556 426 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 GPS2Q13227 327 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 CHIT1Q13231 466 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 LAPTM5Q13571 262 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 SLBPQ14493 270 aaKnown RBP eCLIP17.88■□□□□ 0.45
SSU72-203ENST00000378725 GARNL3Q5VVW2 1013 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 KRT78Q8N1N4 520 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 ANKRD53Q8N9V6 530 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 RDH11Q8TC12 318 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 PROKR1Q8TCW9 393 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 EFCAB11Q9BUY7 163 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 ERVK-6Q9BXR3 956 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 SLC7A5P2Q9GIP4 190 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 AKIRIN1Q9H9L7 192 aaPredicted RBP17.88■□□□□ 0.45
SSU72-203ENST00000378725 SSU72Q9NP77 194 aaKnown RBP17.88■□□□□ 0.45
SSU72-203ENST00000378725 LHX9Q9NQ69 397 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 CUTCQ9NTM9 273 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 ZFP69BQ9UJL9 534 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 ZNF490Q9ULM2 529 aaPredicted RBP17.88■□□□□ 0.45
SSU72-203ENST00000378725 RUVBL1Q9Y265 456 aaKnown RBP17.88■□□□□ 0.45
SSU72-203ENST00000378725 ANGPTL3Q9Y5C1 460 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 ACTL7BQ9Y614 415 aa17.88■□□□□ 0.45
SSU72-203ENST00000378725 P2RX6O15547 441 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 RRP8O43159 456 aaKnown RBP17.87■□□□□ 0.45
SSU72-203ENST00000378725 MED26O95402 600 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 ONECUT2O95948 504 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 KLK3P07288 261 aaPredicted RBP17.87■□□□□ 0.45
SSU72-203ENST00000378725 MYL2P10916 166 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 STAT5AP42229 794 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 ATP1A2P50993 1020 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 PWP1Q13610 501 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 HKDC1Q2TB90 917 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 UNC50Q53HI1 259 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 ZNF678Q5SXM1 525 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 TMIGD1Q6UXZ0 262 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 ASPGQ86U10 573 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 CAMKVQ8NCB2 501 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 ZNF483Q8TF39 744 aaPredicted RBP17.87■□□□□ 0.45
SSU72-203ENST00000378725 SLC13A3Q8WWT9 602 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 CCDC126Q96EE4 140 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 L3HYPDHQ96EM0 354 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 NAF1Q96HR8 494 aaKnown RBP17.87■□□□□ 0.45
SSU72-203ENST00000378725 SEC16BQ96JE7 1060 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 GBP5Q96PP8 586 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 DPH2Q9BQC3 489 aaPredicted RBP17.87■□□□□ 0.45
SSU72-203ENST00000378725 IPPKQ9H8X2 491 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 ZBTB26Q9HCK0 441 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 DHCR7Q9UBM7 475 aaKnown RBP17.87■□□□□ 0.45
SSU72-203ENST00000378725 ZMIZ1Q9ULJ6 1067 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 CEP295Q9C0D2 2601 aa17.87■□□□□ 0.45
SSU72-203ENST00000378725 AGPSO00116 658 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 OR7A17O14581 309 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 TERTO14746 1132 aaKnown RBP17.86■□□□□ 0.45
SSU72-203ENST00000378725 DSCR3O14972 297 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 UGDHO60701 494 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 SPAG7O75391 227 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 MYZAPP0CAP1 466 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 CPA3P15088 417 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 GSTM2P28161 218 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 RBBP5Q15291 538 aaKnown RBP17.86■□□□□ 0.45
SSU72-203ENST00000378725 PAGE2BQ5JRK9 111 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 LIPJQ5W064 366 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 LCN10Q6JVE6 187 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 TTLL10Q6ZVT0 673 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 HDXQ7Z353 690 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 SPACA3Q8IXA5 215 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 L3MBTL4Q8NA19 623 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 TRPV3Q8NET8 790 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 TTLQ8NG68 377 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 NT5CQ8TCD5 201 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 TCP10LQ8TDR4 215 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 CREB3L4Q8TEY5 395 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 C10orf90Q96M02 699 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 NSUN5Q96P11 429 aaKnown RBP17.86■□□□□ 0.45
SSU72-203ENST00000378725 NTMT1Q9BV86 223 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 NLNQ9BYT8 704 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 IQCGQ9H095 443 aaKnown RBP17.86■□□□□ 0.45
SSU72-203ENST00000378725 RHBGQ9H310 441 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 CENPHQ9H3R5 247 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 NOL11Q9H8H0 719 aaKnown RBP17.86■□□□□ 0.45
SSU72-203ENST00000378725 TMBIM4Q9HC24 238 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 SDK2Q58EX2 2172 aa17.86■□□□□ 0.45
SSU72-203ENST00000378725 LOC101059948A0A1B0GTJ6 334 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms