RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 CHRM5P08912 532 aaPredicted RBP13.18□□□□□ -0.3
PRPF18-202ENST00000378572 PDK4Q16654 411 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 SLC6A19Q695T7 634 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 MRGPREQ86SM8 312 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 ISCA2Q86U28 154 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 TRIM42Q8IWZ5 723 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 CPNE9Q8IYJ1 553 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 CLEC1AQ8NC01 280 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 RAB3IL1Q8TBN0 382 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 FAM136AQ96C01 138 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 TCTN2Q96GX1 697 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 PSMG3-AS1Q96PY0 264 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 PSD3Q9NYI0 1048 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 XPR1Q9UBH6 696 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 POLG2Q9UHN1 485 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 MAP4K5Q9Y4K4 846 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 AP1M2Q9Y6Q5 423 aa13.18□□□□□ -0.3
PRPF18-202ENST00000378572 USP9YO00507 2555 aaPredicted RBP13.18□□□□□ -0.3
PRPF18-202ENST00000378572 USP9XQ93008 2570 aaPredicted RBP13.17□□□□□ -0.3
PRPF18-202ENST00000378572 A0A0J9YY10 115 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 ZSCAN9O15535 394 aaPredicted RBP13.17□□□□□ -0.3
PRPF18-202ENST00000378572 ALPPP05187 535 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 CAPN1P07384 714 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 SBK3P0C264 359 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 MSL3P1P0C860 447 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 TFEBP19484 476 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 CCR7P32248 378 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 GNGT1P63211 74 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 CBX1P83916 185 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 PCLAFQ15004 111 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 HIST2H2BCQ6DN03 193 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 NEK10Q6ZWH5 1172 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 HPS6Q86YV9 775 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 ZNF655Q8N720 491 aaPredicted RBP13.17□□□□□ -0.3
PRPF18-202ENST00000378572 CCDC63Q8NA47 563 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 ASZ1Q8WWH4 475 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 KIAA1191Q96A73 305 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 LINGO1Q96FE5 620 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 SCYL1Q96KG9 808 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 FER1L6-AS2Q96M78 137 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 PAIP2Q9BPZ3 127 aaKnown RBP13.17□□□□□ -0.3
PRPF18-202ENST00000378572 NDC1Q9BTX1 674 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 SPRTNQ9H040 489 aaPredicted RBP13.17□□□□□ -0.3
PRPF18-202ENST00000378572 FAM60AQ9NP50 221 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 SPHK1Q9NYA1 384 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 DHCR7Q9UBM7 475 aaKnown RBP13.17□□□□□ -0.3
PRPF18-202ENST00000378572 SPTAN1Q13813 2472 aaKnown RBP13.17□□□□□ -0.3
PRPF18-202ENST00000378572 MED13Q9UHV7 2174 aa13.17□□□□□ -0.3
PRPF18-202ENST00000378572 A1L4Q6 167 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 G3V2L1 256 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 ZBTB14O43829 449 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 GPC4O75487 556 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 CEACAM4O75871 244 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 CPA3P15088 417 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 LSP1P33241 339 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 GLRBP48167 497 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 PRKAA2P54646 552 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 DCDP81605 110 aaKnown RBP13.16□□□□□ -0.3
PRPF18-202ENST00000378572 PLOD1Q02809 727 aaPredicted RBP13.16□□□□□ -0.3
PRPF18-202ENST00000378572 MRPL49Q13405 166 aaKnown RBP13.16□□□□□ -0.3
PRPF18-202ENST00000378572 CYP2A13Q16696 494 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 ZNF658BQ4V348 819 aaPredicted RBP13.16□□□□□ -0.3
PRPF18-202ENST00000378572 VWA5B1Q5TIE3 1220 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 ZYG11AQ6WRX3 759 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 TAX1BP1Q86VP1 789 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 TBC1D21Q8IYX1 336 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 MYO1HQ8N1T3 1032 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 SPATA6LQ8N4H0 392 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 CFAP61Q8NHU2 1237 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 PRR7Q8TB68 274 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 STAG3L4Q8TBR4 150 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 EEF1AKMT1Q8WVE0 214 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 PNPLA2Q96AD5 504 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 PTERQ96BW5 349 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 ILKAPQ9H0C8 392 aaPredicted RBP13.16□□□□□ -0.3
PRPF18-202ENST00000378572 PLEKHB1Q9UF11 243 aaPredicted RBP13.16□□□□□ -0.3
PRPF18-202ENST00000378572 SRPK3Q9UPE1 567 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 CDYLQ9Y232 598 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 UTP20O75691 2785 aaKnown RBP13.16□□□□□ -0.3
PRPF18-202ENST00000378572 SPTBN1Q01082 2364 aaKnown RBP13.16□□□□□ -0.3
PRPF18-202ENST00000378572 KLF11O14901 512 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 KERAO60938 352 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 SLCO2B1O94956 709 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 MPC1LP0DKB6 136 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 MYL2P10916 166 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 ACSBG2Q5FVE4 666 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 ADAMTSL2Q86TH1 951 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 NUDCD3Q8IVD9 361 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 OR5K2Q8NHB8 316 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 PROKR1Q8TCW9 393 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 SREK1Q8WXA9 508 aaKnown RBP13.16□□□□□ -0.3
PRPF18-202ENST00000378572 CCDC126Q96EE4 140 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 IP6K3Q96PC2 410 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 OR2A14Q96R47 310 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 ATOH8Q96SQ7 321 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 OR6C2Q9NZP2 312 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 CIDEBQ9UHD4 219 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 TMCO1Q9UM00 188 aa13.16□□□□□ -0.3
PRPF18-202ENST00000378572 SLC5A10A0PJK1 596 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms