RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SPCS2Q15005 226 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 CYP2A13Q16696 494 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 FAM98BQ52LJ0 330 aaKnown RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 RUNDC3AQ59EK9 446 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 C6orf52Q5T4I8 152 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 ZNF648Q5T619 568 aaPredicted RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 RAET1GQ6H3X3 334 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 FAM122CQ6P4D5 195 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 BORAQ6PGQ7 559 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 SPRED2Q7Z698 418 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 OR52E4Q8NGH9 312 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 OR56A3Q8NH54 315 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 CXorf40AQ8TE69 158 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 FGF13Q92913 245 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 FCRL1Q96LA6 429 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 PADI4Q9UM07 663 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 GPR34Q9UPC5 381 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 RUVBL1Q9Y265 456 aaKnown RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 KCNE2Q9Y6J6 123 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 MKI67P46013 3256 aaKnown RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 RNF103-CHMP3A0A140T963 221 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 TRIM64A6NGJ6 449 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 TRIM64BA6NI03 449 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 NCK1P16333 377 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 AMD1P17707 334 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 CFL1P23528 166 aaKnown RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 NRIP1P48552 1158 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 CDK9P50750 372 aaKnown RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 OR4D2P58180 307 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 MTPNP58546 118 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 PHC1P78364 1004 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 ZNF234Q14588 700 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 ATP6AP1Q15904 470 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 ZXDCQ2QGD7 858 aaPredicted RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 LRIF1Q5T3J3 769 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 ERN2Q76MJ5 926 aaKnown RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 C11orf96Q7Z7L8 435 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 ADGRD2Q7Z7M1 963 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 GPR180Q86V85 440 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 RALGPS2Q86X27 583 aaPredicted RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 LURAP1LQ8IV03 231 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 DTX3Q8N9I9 347 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 PMM1Q92871 262 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 LINC00615Q96LM1 132 aaPredicted RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 HDAC8Q9BY41 377 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 VAPAQ9P0L0 249 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 VPS29Q9UBQ0 182 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 FAM8A1Q9UBU6 413 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 MKL2Q9ULH7 1088 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 ZFC3H1O60293 1989 aaKnown RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 PRRC2BQ5JSZ5 2229 aaKnown RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 ELOVL7A1L3X0 281 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 KRBA1A5PL33 1030 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 TBC1D3BA6NDS4 549 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 DFNA5O60443 496 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 DEAF1O75398 565 aaPredicted RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 RAP2AP10114 183 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 PCNAP12004 261 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 C6P13671 934 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 HLA-EP13747 358 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 HRH2P25021 359 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 CHRNB3Q05901 458 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 CD300CQ08708 224 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 CAPN13Q6MZZ7 669 aaPredicted RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 NOXRED1Q6NXP6 359 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 YAF2Q8IY57 180 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 KRTCAP2Q8N6L1 136 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 MED8Q96G25 268 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 ZNF583Q96ND8 569 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 FAM129BQ96TA1 746 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 TRIM8Q9BZR9 551 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 TMEM245Q9H330 911 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 RPF2Q9H7B2 306 aaKnown RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 ITM2CQ9NQX7 267 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 INVSQ9Y283 1065 aa7.94□□□□□ -1.14
UBR4-202ENST00000375224 HEMK1Q9Y5R4 338 aaPredicted RBP7.94□□□□□ -1.14
UBR4-202ENST00000375224 C7orf72A4D263 438 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 TMEM202A6NGA9 273 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 H3BUI4 141 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 ZW10O43264 779 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 OXTRP30559 389 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 EIF2DP41214 584 aaKnown RBP7.93□□□□□ -1.14
UBR4-202ENST00000375224 ASMTP46597 345 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 PREPP48147 710 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 SLC9A3P48764 834 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 YBX1P67809 324 aaKnown RBP7.93□□□□□ -1.14
UBR4-202ENST00000375224 GAB4Q2WGN9 574 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 KRT80Q6KB66 452 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 SPRED1Q7Z699 444 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 TRAPPC5Q8IUR0 188 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 CHERPQ8IWX8 916 aaKnown RBP7.93□□□□□ -1.14
UBR4-202ENST00000375224 VN1R2Q8NFZ6 395 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 WDR20Q8TBZ3 569 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 ZFYVE19Q96K21 471 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 APOLD1Q96LR9 279 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 PKP4Q99569 1192 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 SLC29A1Q99808 456 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 DPEP2Q9H4A9 486 aa7.93□□□□□ -1.14
UBR4-202ENST00000375224 DLGAP4Q9Y2H0 992 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms