RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 STX2P32856 288 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 CCR8P51685 355 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 SLC12A2P55011 1212 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 MEF2AQ02078 507 aaPredicted RBP17.99■□□□□ 0.47
CKS1B-203ENST00000368439 OCA2Q04671 838 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 EFTUD2Q15029 972 aaKnown RBP eCLIP17.99■□□□□ 0.47
CKS1B-203ENST00000368439 SYT16Q17RD7 645 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 UBAP2Q5T6F2 1119 aaKnown RBP17.99■□□□□ 0.47
CKS1B-203ENST00000368439 GRTP1Q5TC63 336 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 TMEM214Q6NUQ4 689 aaKnown RBP17.99■□□□□ 0.47
CKS1B-203ENST00000368439 PRSS41Q7RTY9 318 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 ADAMTSL2Q86TH1 951 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 THOC6Q86W42 341 aaKnown RBP17.99■□□□□ 0.47
CKS1B-203ENST00000368439 CTAGE3PQ8IX95 158 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 KLHDC8AQ8IYD2 350 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 GALNT16Q8N428 558 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 SPATA6LQ8N4H0 392 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 PPM1NQ8N819 430 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 SLC5A11Q8WWX8 675 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 MMABQ96EY8 250 aaPredicted RBP17.99■□□□□ 0.47
CKS1B-203ENST00000368439 TSPAN17Q96FV3 270 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 UBXN10Q96LJ8 280 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 UNKQ9C0B0 810 aaKnown RBP17.99■□□□□ 0.47
CKS1B-203ENST00000368439 TGIF2Q9GZN2 237 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 GPR83Q9NYM4 423 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 TXNDC16Q9P2K2 825 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 FBXL4Q9UKA2 621 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 UBR5O95071 2799 aaPredicted RBP17.98■□□□□ 0.47
CKS1B-203ENST00000368439 PRPF4O43172 522 aaKnown RBP eCLIP17.98■□□□□ 0.47
CKS1B-203ENST00000368439 TUBB4AP04350 444 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 ANXA5P08758 320 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 CCDC166P0CW27 439 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 STMN1P16949 149 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 SPRP35270 261 aaPredicted RBP17.98■□□□□ 0.47
CKS1B-203ENST00000368439 GMPRP36959 345 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 SLC6A12P48065 614 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 EFNA3P52797 238 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 RAPSNQ13702 412 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 NDUFA9Q16795 377 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 C18orf21Q32NC0 220 aaPredicted RBP17.98■□□□□ 0.47
CKS1B-203ENST00000368439 ASPGQ86U10 573 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 PRSS58Q8IYP2 241 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 TEX19Q8NA77 164 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 CLEC1AQ8NC01 280 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 KCT2Q8NC54 265 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 CAMKVQ8NCB2 501 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 ZNF740Q8NDX6 193 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 OR11G2Q8NGC1 345 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 OR9A4Q8NGU2 314 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 RHBDF1Q96CC6 855 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 CRB3Q9BUF7 120 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 ZNF552Q9H707 407 aaPredicted RBP17.98■□□□□ 0.47
CKS1B-203ENST00000368439 TRPC4Q9UBN4 977 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 SLC22A14Q9Y267 594 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 ZNF451Q9Y4E5 1061 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 MAP4K5Q9Y4K4 846 aa17.98■□□□□ 0.47
CKS1B-203ENST00000368439 TRBC2A0A5B9 178 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 H0YIG0 161 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 ALOX12BO75342 701 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 WISP1O95388 367 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 NSA2O95478 260 aaKnown RBP17.97■□□□□ 0.47
CKS1B-203ENST00000368439 ECHS1P30084 290 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 GRK3P35626 688 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 HNMTP50135 292 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 CSRP3P50461 194 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 RAB10P61026 200 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 MAT1AQ00266 395 aaKnown RBP17.97■□□□□ 0.47
CKS1B-203ENST00000368439 NAB1Q13506 487 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 MYBPC3Q14896 1274 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 TGFBIQ15582 683 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 RBBP7Q16576 425 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 NADK2Q4G0N4 442 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 ATG9BQ674R7 924 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 PDSS2Q86YH6 399 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 RELL1Q8IUW5 271 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 ZC3H7AQ8IWR0 971 aaKnown RBP17.97■□□□□ 0.47
CKS1B-203ENST00000368439 SLC13A3Q8WWT9 602 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 MOCOSQ96EN8 888 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 TSNARE1Q96NA8 513 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 FAM129AQ9BZQ8 928 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 PELI2Q9HAT8 420 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 MKKSQ9NPJ1 570 aaPredicted RBP17.97■□□□□ 0.47
CKS1B-203ENST00000368439 ATP13A2Q9NQ11 1180 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 C14orf105Q9NVL8 296 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 NINJ2Q9NZG7 142 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 C3orf18Q9UK00 162 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 MYO18BQ8IUG5 2567 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 NBASA2RRP1 2371 aa17.97■□□□□ 0.47
CKS1B-203ENST00000368439 HMX2A2RU54 273 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 CTAGE15A4D2H0 777 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 TAPBPO15533 448 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 SLC35E2BP0CK96 405 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 GDF5P43026 501 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 SCTRP47872 440 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 AVPR1BP47901 424 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 REEP5Q00765 189 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 Q0VFX4 171 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 DLG1Q12959 904 aa17.96■□□□□ 0.47
CKS1B-203ENST00000368439 AIMP2Q13155 320 aaKnown RBP17.96■□□□□ 0.47
CKS1B-203ENST00000368439 CSHL1Q14406 222 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms