RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 DNAJB8Q8NHS0 232 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 CALML6Q8TD86 181 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 METTL21AQ8WXB1 218 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 CYTH2Q99418 400 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 AARSD1Q9BTE6 412 aaKnown RBP15.15■□□□□ 0.02
CKS1B-202ENST00000368436 VN1R1Q9GZP7 353 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 CCDC177Q9NQR7 707 aaPredicted RBP15.15■□□□□ 0.02
CKS1B-202ENST00000368436 C20orf96Q9NUD7 363 aaPredicted RBP15.15■□□□□ 0.02
CKS1B-202ENST00000368436 STMN3Q9NZ72 180 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 ABI3Q9P2A4 366 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 PRAMEF2O60811 474 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 RASAL1O95294 804 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 STATHP02808 62 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 BCL6P41182 706 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 TBPL1P62380 186 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 CSNK1G2P78368 415 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 MPP1Q00013 466 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 TIAL1Q01085 375 aaKnown RBP eCLIP15.14■□□□□ 0.01
CKS1B-202ENST00000368436 HSP90AA5PQ58FG0 334 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 ABHD17BQ5VST6 288 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 SP5Q6BEB4 398 aaPredicted RBP15.14■□□□□ 0.01
CKS1B-202ENST00000368436 LRRC8EQ6NSJ5 796 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 TMEM214Q6NUQ4 689 aaKnown RBP15.14■□□□□ 0.01
CKS1B-202ENST00000368436 H3F3CQ6NXT2 135 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 CPEB2Q7Z5Q1 589 aaKnown RBP15.14■□□□□ 0.01
CKS1B-202ENST00000368436 PCGF5Q86SE9 256 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 OR51Q1Q8NH59 317 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 MS4A14Q96JA4 679 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 PBKQ96KB5 322 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 CCDC138Q96M89 665 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 PCBD2Q9H0N5 130 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 TEKT2Q9UIF3 430 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 ADAMTS6Q9UKP5 1117 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 PDE10AQ9Y233 779 aa15.14■□□□□ 0.01
CKS1B-202ENST00000368436 HNRNPRO43390 633 aaKnown RBP15.13■□□□□ 0.01
CKS1B-202ENST00000368436 SEC24DO94855 1032 aaPredicted RBP15.13■□□□□ 0.01
CKS1B-202ENST00000368436 CRYABP02511 175 aaKnown RBP15.13■□□□□ 0.01
CKS1B-202ENST00000368436 UQCRHP07919 91 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 MYBL2P10244 700 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 MST1P26927 711 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 CCZ1BP86790 482 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 CCZ1P86791 482 aaPredicted RBP15.13■□□□□ 0.01
CKS1B-202ENST00000368436 ZNF33BQ06732 778 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 PTK6Q13882 451 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 PLAG1Q6DJT9 500 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 CCDC137Q6PK04 289 aaKnown RBP15.13■□□□□ 0.01
CKS1B-202ENST00000368436 GFRALQ6UXV0 394 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 LANCL3Q6ZV70 420 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 CAMKVQ8NCB2 501 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 SUN3Q8TAQ9 357 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 MCOLN3Q8TDD5 553 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 EEF1AKMT1Q8WVE0 214 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 MACROD1Q9BQ69 325 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 FAM167BQ9BTA0 163 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 FAM129AQ9BZQ8 928 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 COPG2Q9UBF2 871 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 C19orf25Q9UFG5 118 aaPredicted RBP15.13■□□□□ 0.01
CKS1B-202ENST00000368436 SH2B3Q9UQQ2 575 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 MAD1L1Q9Y6D9 718 aa15.13■□□□□ 0.01
CKS1B-202ENST00000368436 IGHV3-20A0A0C4DH32 117 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 SLC16A5O15375 505 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 LCMT2O60294 686 aaKnown RBP15.12■□□□□ 0.01
CKS1B-202ENST00000368436 UNC5CO95185 931 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 C8GP07360 202 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 IL1RNP18510 177 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 XCR1P46094 333 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 AGTR2P50052 363 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 MINDY4Q4G0A6 757 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 UGT3A1Q6NUS8 523 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 AGTRAPQ6RW13 159 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 ANKRD37Q7Z713 158 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 PDSS2Q86YH6 399 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.12■□□□□ 0.01
CKS1B-202ENST00000368436 KCT2Q8NC54 265 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 C2CD4AQ8NCU7 369 aaPredicted RBP15.12■□□□□ 0.01
CKS1B-202ENST00000368436 MARVELD3Q96A59 401 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 ZNF354BQ96LW1 612 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 SGPP1Q9BX95 441 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 PARVBQ9HBI1 364 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 ANKHQ9HCJ1 492 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 IARS2Q9NSE4 1012 aaKnown RBP15.12■□□□□ 0.01
CKS1B-202ENST00000368436 HCN3Q9P1Z3 774 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 SEC14L3Q9UDX4 400 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 TRMT6Q9UJA5 497 aaKnown RBP15.12■□□□□ 0.01
CKS1B-202ENST00000368436 PPP2R2CQ9Y2T4 447 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 JRKLQ9Y4A0 524 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 PCDHGB6Q9Y5F9 930 aa15.12■□□□□ 0.01
CKS1B-202ENST00000368436 LRBAP50851 2863 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 FEZF1A0PJY2 475 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 OR2W5A6NFC9 320 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 A8MUI8 341 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 PRSS44E7EML9 344 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 SGK494L7N484 410 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 NPPBP16860 134 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 CCND1P24385 295 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 GABRB3P28472 473 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 TNFRSF8P28908 595 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 RGS4P49798 205 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 SP140Q13342 867 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 ART3Q13508 389 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms