RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 WDR34Q96EX3 536 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 HBEGFQ99075 208 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 PELI2Q9HAT8 420 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 FOXJ2Q9P0K8 574 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 PCDHGA4Q9Y5G9 962 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 TEX51A0A1B0GUA7 166 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 POLR1CO15160 346 aaPredicted RBP17.1■□□□□ 0.33
CLK2-202ENST00000361168 SH3BGRLO75368 114 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 SLC18A1P54219 525 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 ARL13AQ5H913 290 aaPredicted RBP17.1■□□□□ 0.33
CLK2-202ENST00000361168 WASHC2DQ5SRD0 308 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 TMTC4Q5T4D3 741 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 METTL2BQ6P1Q9 378 aaKnown RBP17.1■□□□□ 0.33
CLK2-202ENST00000361168 TMIGD1Q6UXZ0 262 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.1■□□□□ 0.331e-9■■■■□ 20.5
CLK2-202ENST00000361168 AGR3Q8TD06 166 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 MTFMTQ96DP5 389 aaKnown RBP17.1■□□□□ 0.33
CLK2-202ENST00000361168 PTCD3Q96EY7 689 aaKnown RBP17.1■□□□□ 0.33
CLK2-202ENST00000361168 NTMT1Q9BV86 223 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 AICDAQ9GZX7 198 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 CHRNA10Q9GZZ6 450 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 FARSBQ9NSD9 589 aaKnown RBP17.1■□□□□ 0.33
CLK2-202ENST00000361168 NKIRAS1Q9NYS0 192 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 MID2Q9UJV3 735 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 PLCL2Q9UPR0 1127 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 MRPS2Q9Y399 296 aaKnown RBP17.1■□□□□ 0.33
CLK2-202ENST00000361168 SEC16AO15027 2179 aa17.1■□□□□ 0.33
CLK2-202ENST00000361168 KCNE1BA0A087WTH5 132 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 TMX2-CTNND1H3BSU7 103 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 CLDN9O95484 217 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 NTRK1P04629 796 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 NR1D1P20393 614 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 CASP2P42575 452 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 SCTRP47872 440 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 PCDH1Q08174 1060 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 LCP2Q13094 533 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 TBCCQ15814 346 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 MILR1Q7Z6M3 343 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 ZNF655Q8N720 491 aaPredicted RBP17.09■□□□□ 0.33
CLK2-202ENST00000361168 CDYL2Q8N8U2 506 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 KCT2Q8NC54 265 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 OR7G3Q8NG95 312 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 AGAP11Q8TF27 550 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 AIF1LQ9BQI0 150 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 CAPS2Q9BXY5 557 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 EHD1Q9H4M9 534 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 POLR1BQ9H9Y6 1135 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 MID1IP1Q9NPA3 183 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 FBXO8Q9NRD0 319 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 ANKMY1Q9P2S6 941 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 TIMM22Q9Y584 194 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 TRBC2A0A5B9 178 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 TMEM233B4DJY2 109 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 OR2B3O76000 313 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 B3GALT4O96024 378 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 SERPIND1P05546 499 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 MSL3P1P0C860 447 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 HRH2P25021 359 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 SERPINB3P29508 390 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 L3MBTL4Q8NA19 623 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 N4BP2L2Q92802 583 aaPredicted RBP17.09■□□□□ 0.33
CLK2-202ENST00000361168 SLC46A1Q96NT5 459 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 MTERF1Q99551 399 aaKnown RBP17.09■□□□□ 0.33
CLK2-202ENST00000361168 SARGQ9BW04 601 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 AKIRIN1Q9H9L7 192 aaPredicted RBP17.09■□□□□ 0.33
CLK2-202ENST00000361168 IRAK4Q9NWZ3 460 aa17.09■□□□□ 0.33
CLK2-202ENST00000361168 AKAP7Q9P0M2 348 aaPredicted RBP17.09■□□□□ 0.33
CLK2-202ENST00000361168 APC2O95996 2303 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 B4E171 279 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 C4orf51C9J302 202 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 BIRC5O15392 142 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 MAP3K7O43318 606 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 GRK3P35626 688 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 HNF4AP41235 474 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 TSPAN7P41732 249 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 ACY1Q03154 408 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 HYAL2Q12891 473 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 EIF3IQ13347 325 aaKnown RBP17.08■□□□□ 0.33
CLK2-202ENST00000361168 DDX39BQ13838 428 aaKnown RBP17.08■□□□□ 0.33
CLK2-202ENST00000361168 ZRSR2Q15696 482 aaKnown RBP17.08■□□□□ 0.33
CLK2-202ENST00000361168 ZC3H12BQ5HYM0 836 aaKnown RBP17.08■□□□□ 0.33
CLK2-202ENST00000361168 CLEC6AQ6EIG7 209 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 GRHL2Q6ISB3 625 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 GPRIN3Q6ZVF9 776 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 PPP1R3BQ86XI6 285 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 MFSD9Q8NBP5 474 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 GRAMD1AQ96CP6 724 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 ZNF285Q96NJ3 590 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 ZNF382Q96SR6 550 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 DHCR7Q9UBM7 475 aaKnown RBP17.08■□□□□ 0.33
CLK2-202ENST00000361168 RARRES3Q9UL19 164 aa17.08■□□□□ 0.33
CLK2-202ENST00000361168 RUVBL1Q9Y265 456 aaKnown RBP17.08■□□□□ 0.33
CLK2-202ENST00000361168 NDUFS4O43181 175 aa17.08■□□□□ 0.32
CLK2-202ENST00000361168 ZNF749O43361 778 aa17.08■□□□□ 0.32
CLK2-202ENST00000361168 BRINP1O60477 761 aa17.08■□□□□ 0.32
CLK2-202ENST00000361168 OTCP00480 354 aa17.08■□□□□ 0.32
CLK2-202ENST00000361168 CAPN1P07384 714 aa17.08■□□□□ 0.32
CLK2-202ENST00000361168 FGF5P12034 268 aa17.08■□□□□ 0.32
CLK2-202ENST00000361168 RPS15AP62244 130 aaKnown RBP17.08■□□□□ 0.32
CLK2-202ENST00000361168 HSP90B2PQ58FF3 399 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms