RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TRBV23OR9-2A0A075B6M9 112 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 PRAMEF33A0A0G2JMD5 474 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 FAM221BA6H8Z2 402 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 B4DGG1 531 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 CHRM5P08912 532 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 ACPPP15309 386 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 CMPK1P30085 196 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 SERPINB1P30740 379 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 LIMK1P53667 647 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 UBE2IP63279 158 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 PRDX1Q06830 199 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 SF3A2Q15428 464 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 DUOXA1Q1HG43 343 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 DNAL1Q4LDG9 190 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 RFTN2Q52LD8 501 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 CACHD1Q5VU97 1274 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 IL23RQ5VWK5 629 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 RINLQ6ZS11 566 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 FAM129CQ86XR2 697 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 FAM9CQ8IZT9 166 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 NAGSQ8N159 534 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 KIF2BQ8N4N8 673 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 FAM46DQ8NEK8 389 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 OR2A1Q8NGT9 310 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 HUS1BQ8NHY5 278 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 LMX1AQ8TE12 382 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 SLC37A2Q8TED4 501 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 PIGKQ92643 395 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 METTL2AQ96IZ6 378 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 NRTNQ99748 197 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 SLC25A23Q9BV35 468 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 C1orf21Q9H246 121 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 NT5DC2Q9H857 520 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 SLC40A1Q9NP59 571 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 MRPS30Q9NP92 439 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 CUEDC1Q9NWM3 386 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 CCDC167Q9P0B6 97 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 TMED5Q9Y3A6 229 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 PI4KAP42356 2102 aa13.31□□□□□ -0.28
PDLIM5-203ENST00000359265 LOC100653049A0A140TA62 436 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 A0A1B0GVT2 93 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 BBIP1A8MTZ0 92 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 MAGEB17A8MXT2 336 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 ISM1B1AKI9 464 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 H0YHG0 523 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 FOXE1O00358 373 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 NR5A2O00482 541 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 PRICKLE3O43900 615 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 KRT34O76011 436 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 SNRPB2P08579 225 aaKnown RBP13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 NQO1P15559 274 aaKnown RBP13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 HRH2P25021 359 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 PIK3CBP42338 1070 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 ARRB1P49407 418 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 DIO3P55073 304 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 MEF2AQ02078 507 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 FOXC1Q12948 553 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 STX5Q13190 355 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 GPR18Q14330 331 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 KIR2DS3Q14952 304 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 PAOXQ6QHF9 649 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 CYP20A1Q6UW02 462 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 TMIGD1Q6UXZ0 262 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 ARHGAP24Q8N264 748 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 TBC1D19Q8N5T2 526 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 RBM15BQ8NDT2 890 aaKnown RBP13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 ZNF548Q8NEK5 533 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 OR4E2Q8NGC2 313 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 TSPEARQ8WU66 669 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 PATE1Q8WXA2 126 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 JPH3Q8WXH2 748 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 SLC22A18Q96BI1 424 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 LOXL4Q96JB6 756 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 MTERF1Q99551 399 aaKnown RBP13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 CAAP1Q9H8G2 361 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 DMRT3Q9NQL9 472 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 NDE1Q9NXR1 346 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 TAS2R1Q9NYW7 299 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 VPS29Q9UBQ0 182 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 CACNA1EQ15878 2313 aa13.3□□□□□ -0.28
PDLIM5-203ENST00000359265 SDK1Q7Z5N4 2213 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 TMEM8BA6NDV4 472 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 YKT6O15498 198 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 AQP9O43315 295 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 DFNA5O60443 496 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 SLC22A3O75751 556 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 MYO1DO94832 1006 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 ANXA6P08133 673 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 G6PDP11413 515 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 PRPS2P11908 318 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 PEBP1P30086 187 aaKnown RBP13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 GRK3P35626 688 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 CTSKP43235 329 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 NUDT2P50583 147 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 NME5P56597 212 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 KCNK10P57789 538 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 RPS13P62277 151 aaKnown RBP13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 KCNJ2P63252 427 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 HHEXQ03014 270 aa13.29□□□□□ -0.28
PDLIM5-203ENST00000359265 ACSM2AQ08AH3 577 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms