RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ERI3O43414 337 aaKnown RBP11.4□□□□□ -0.58
COL9A1-202ENST00000357250 G6PDP11413 515 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 ATF6P18850 670 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 FMO3P31513 532 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 SEMG2Q02383 582 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 MXD1Q05195 221 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 KLHDC10Q6PID8 442 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 TMEM135Q86UB9 458 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 OR9A1PQ8NGU1 263 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 OR2AJ1Q8NGZ0 328 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 ZFAND2BQ8WV99 257 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 GAL3ST4Q96RP7 486 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 TMEM45AQ9NWC5 275 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 MARK1Q9P0L2 795 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 PCDHGB2Q9Y5G2 931 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 BTAF1O14981 1849 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 TBX1O43435 398 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 CLDN7O95471 211 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 SOD2P04179 222 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 ITIH1P19827 911 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 DGKQP52824 942 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 PITX1P78337 314 aaPredicted RBP11.4□□□□□ -0.58
COL9A1-202ENST00000357250 ZNF763Q0D2J5 394 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 RAB6CQ53S08 254 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 ANO7Q6IWH7 933 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 RAB6CQ9H0N0 254 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 CARS2Q9HA77 564 aaKnown RBP11.4□□□□□ -0.58
COL9A1-202ENST00000357250 IFT46Q9NQC8 304 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 ACSL5Q9ULC5 683 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 TRBV23OR9-2A0A075B6M9 112 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 PRAMEF33A0A0G2JMD5 474 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 CAPN14A8MX76 684 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 PRAMEF10O60809 474 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 INMTO95050 263 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 IQCF3P0C7M6 154 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 ACP5P13686 325 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 HTR1EP28566 365 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 GJA5P36382 358 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 GNALP38405 381 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 HTRA3P83110 453 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 FADDQ13158 208 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 OGFOD2Q6N063 350 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 PLCZ1Q86YW0 608 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 RAB7BQ96AH8 199 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 MED11Q9P086 117 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 INSL5Q9Y5Q6 135 aa11.4□□□□□ -0.58
COL9A1-202ENST00000357250 STRCP1A6NGW2 1772 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 MYADML2A6NDP7 307 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 CPSF4LA6NMK7 179 aaKnown RBP11.4□□□□□ -0.59
COL9A1-202ENST00000357250 CHP2O43745 196 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 PIM1P11309 404 aaPredicted RBP11.4□□□□□ -0.59
COL9A1-202ENST00000357250 RBM34P42696 430 aaKnown RBP11.4□□□□□ -0.59
COL9A1-202ENST00000357250 SUOXP51687 545 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 MOGSQ13724 837 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF829Q3KNS6 432 aaPredicted RBP11.4□□□□□ -0.59
COL9A1-202ENST00000357250 GPRC6AQ5T6X5 926 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 PRPF38BQ5VTL8 546 aaKnown RBP11.4□□□□□ -0.59
COL9A1-202ENST00000357250 REEP3Q6NUK4 255 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 TMEM17Q86X19 198 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 DNAJA4Q8WW22 397 aaPredicted RBP11.4□□□□□ -0.59
COL9A1-202ENST00000357250 MNTQ99583 582 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 PAAF1Q9BRP4 392 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 HHATLQ9HCP6 504 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 Q9N2J8 555 aa11.4□□□□□ -0.59
COL9A1-202ENST00000357250 A0A096LPI6 279 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 TMEM233B4DJY2 109 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 KLK1P06870 262 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 F8A1P23610 371 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 FSHRP23945 695 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 TSPAN5P62079 268 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 TXNL4AP83876 142 aaKnown RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 SOX4Q06945 474 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 KLHL26Q53HC5 615 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 TECRLQ5HYJ1 363 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 C6orf136Q5SQH8 315 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 LRRC66Q68CR7 880 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 PIM3Q86V86 326 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 TMEM40Q8WWA1 233 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 KAT2AQ92830 837 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 ZBED3Q96IU2 234 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 HSH2DQ96JZ2 352 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 NDC1Q9BTX1 674 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 ELAC1Q9H777 363 aaKnown RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 FKBP7Q9Y680 259 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 EIF3FO00303 357 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 GSRP00390 522 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 LINGO3P0C6S8 592 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 MAGP20916 626 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 EDNRBP24530 442 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 NRIP1P48552 1158 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 SLC11A1P49279 550 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 GATMP50440 423 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 TLE2Q04725 743 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 FPGSQ05932 587 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 ATP6AP1Q15904 470 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 SPANXN4Q5MJ08 99 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 IDNKQ5T6J7 187 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 SMARCD3Q6STE5 483 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 CEACAM20Q6UY09 585 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms