RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 PELOQ9BRX2 385 aaKnown RBP6.29□□□□□ -1.4
UPF2-201ENST00000356352 G6PC3Q9BUM1 346 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 MS4A12Q9NXJ0 267 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 SCP2D1Q9UJQ7 156 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 KCNIP3Q9Y2W7 256 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 FAM221BA6H8Z2 402 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 MANBAO00462 879 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 GNB5O14775 395 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ARPC2O15144 300 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 HLA-DQB2P05538 268 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 GSTT2P0CG29 244 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 BCKDHAP12694 445 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SHMT2P34897 504 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 NRIP1P48552 1158 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CDKN1CP49918 316 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 SLC18A1P54219 525 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CASP6P55212 293 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CLRN1P58418 232 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CDK6Q00534 326 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZNF460Q14592 562 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SIRPB2Q5JXA9 342 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TPRG1LQ5T0D9 272 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CLEC20AQ6ZU45 233 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 OR6N1Q8NGY5 312 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TBX5Q99593 518 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 NUDT15Q9NV35 164 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 MGAT4BQ9UQ53 548 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 DNMT3AQ9Y6K1 912 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 CDH10Q9Y6N8 788 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 KLHL33A6NCF5 533 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZSCAN5BA6NJL1 495 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 YJEFN3A6XGL0 299 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CCL22O00626 93 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 NRP1O14786 923 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SCGB1D2O95969 90 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 MT-ND5P03915 603 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZNF8P17098 575 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 HOXB9P17482 250 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 MAGP20916 626 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 FPR1P21462 350 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 FMO3P31513 532 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZNF84P51523 738 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 S100A10P60903 97 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 BLMHQ13867 455 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SCGB2B2Q4G0G5 96 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ALG10BQ5I7T1 473 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 LRRC66Q68CR7 880 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZNF783Q6ZMS7 281 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SSX6Q7RTT6 188 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZBTB46Q86UZ6 589 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 UBE2J2Q8N2K1 259 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 JAGN1Q8N5M9 183 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 DCBLD1Q8N8Z6 715 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 STOML3Q8TAV4 291 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SLC7A6OSQ96CW6 309 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 OTUB2Q96DC9 234 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 PYURFQ96I23 114 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CADM1Q9BY67 442 aaKnown RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 SLC5A7Q9GZV3 580 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SMOC2Q9H3U7 446 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SEC61A2Q9H9S3 476 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TAC3Q9UHF0 121 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ADGRB2O60241 1585 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 NID2Q14112 1375 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 DFNA5O60443 496 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 KLK1P06870 262 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 HEXBP07686 556 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 YES1P07947 543 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 IL3P08700 152 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 AQP4P55087 323 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 NFATC2Q13469 925 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 DHCR24Q15392 516 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SLC10A6Q3KNW5 377 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SMYD5Q6GMV2 418 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TPRG1Q6ZUI0 275 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 MMAAQ8IVH4 418 aaKnown RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 C1orf52Q8N6N3 182 aaKnown RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 MFSD2AQ8NA29 543 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 STON2Q8WXE9 905 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TFAP2BQ92481 460 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ARHGAP9Q9BRR9 750 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 NPLQ9BXD5 320 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZNF350Q9GZX5 532 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TMEM168Q9H0V1 697 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 MYNNQ9NPC7 610 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TIGARQ9NQ88 270 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 HPF1Q9NWY4 346 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 B4GALT7Q9UBV7 327 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 NUP50Q9UKX7 468 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CMAHPQ9Y471 501 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 RIPK3Q9Y572 518 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TEX13DA0A0J9YY54 714 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 A0A1W2PRU2 124 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SOWAHBA6NEL2 793 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SAP18O00422 153 aaKnown RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 SLC16A5O15375 505 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 PPP1R11O60927 126 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 IL33O95760 270 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TGFB1P01137 390 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 UNGP13051 313 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms