RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 IL1AP01583 271 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 CBLBQ13191 982 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 BCO2Q9BYV7 579 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 TMEM185BQ9H7F4 350 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 BORCS7-ASMTA0A0B4J1R7 106 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 CCR3P51677 355 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 SUSD1Q6UWL2 747 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 MAPK15Q8TD08 544 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 BORCS7Q96B45 105 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 HSPBAP1Q96EW2 488 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 AGAP2Q99490 1192 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 FKBPLQ9UIM3 349 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 PCDHB14Q9Y5E9 798 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 INPPL1O15357 1258 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 MSR1P21757 451 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 GGT2P36268 569 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 LUMP51884 338 aaPredicted RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 FAM69BQ5VUD6 431 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 PAPOLGQ9BWT3 736 aaKnown RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 KCNH6Q9H252 994 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 FBRSL1Q9HCM7 1045 aaKnown RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 EIF2B3Q9NR50 452 aaKnown RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 ASB6Q9NWX5 421 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 ADCY10Q96PN6 1610 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 NEXMIFQ5QGS0 1516 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 SAGE2PA6NJ88 616 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 ARGFXA6NJG6 315 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 ZNF850A8MQ14 1090 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 SEC14L5O43304 696 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 RAB36O95755 333 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 ENDOUP21128 410 aaKnown RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 DPYSL2Q16555 572 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 ZC3H14Q6PJT7 736 aaKnown RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 TRABD2AQ86V40 505 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 BPIFB1Q8TDL5 484 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 LIN37Q96GY3 246 aaPredicted RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 SLC25A44Q96H78 314 aaPredicted RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 C11orf84Q9BUA3 381 aaPredicted RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 SMG9Q9H0W8 520 aaKnown RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 ENAMQ9NRM1 1142 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 B3GALT1Q9Y5Z6 326 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 MYO3AQ8NEV4 1616 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 A0A0A6YYH2 397 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 A6NJ64 397 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 THEGLP0DJG4 465 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 EIF5AL1Q6IS14 154 aaKnown RBP16.78■□□□□ 0.28
COL27A1-201ENST00000356083 SDSLQ96GA7 329 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 C7orf34Q96L11 122 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 NUSAP1Q9BXS6 441 aaKnown RBP16.78■□□□□ 0.28
COL27A1-201ENST00000356083 C2orf72A6NCS6 295 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 OPN1SWP03999 348 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 ADH7P40394 386 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 UBE2NP61088 152 aaKnown RBP16.78■□□□□ 0.28
COL27A1-201ENST00000356083 PYROXD2Q8N2H3 581 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 TEX19Q8NA77 164 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 ANKK1Q8NFD2 765 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 C1orf109Q9NX04 203 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 RCOR3Q9P2K3 495 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-201ENST00000356083 TNFRSF10DQ9UBN6 386 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 PLA2R1Q13018 1463 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 MAFO75444 373 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-201ENST00000356083 RAD51DO75771 328 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 RAC2P15153 192 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 RPS2P15880 293 aaKnown RBP16.78■□□□□ 0.28
COL27A1-201ENST00000356083 STK11Q15831 433 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 P2RY8Q86VZ1 359 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 NPAS4Q8IUM7 802 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 RBMS1P29558 406 aaKnown RBP16.78■□□□□ 0.28
COL27A1-201ENST00000356083 BATFQ16520 125 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 CERS6Q6ZMG9 384 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 CD180Q99467 661 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 TAC3Q9UHF0 121 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 hCG_1818297A0A087WSY0 165 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 BBIP1A8MTZ0 92 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 CXCR6O00574 342 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 HCRTR2O43614 444 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 ALPIP09923 528 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 FOSL1P15407 271 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 CEACAM20Q6UY09 585 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 TOP6BLQ8N6T0 577 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 LRTOMTQ8WZ04 291 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 SCO2O43819 266 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 MATN1P21941 496 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 GSTM4Q03013 218 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 SSX2Q16385 188 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 TGM7Q96PF1 710 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 PAK6Q9NQU5 681 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-201ENST00000356083 SORCS3Q9UPU3 1222 aa16.78■□□□□ 0.28
COL27A1-201ENST00000356083 GLDCP23378 1020 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 PRKAR1BP31321 381 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 PRAMEF14Q5SWL7 426 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 PRAMEF13Q5VWM6 474 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 ERN2Q76MJ5 926 aaKnown RBP16.77■□□□□ 0.28
COL27A1-201ENST00000356083 OR6Q1Q8NGQ2 317 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 IL21RQ9HBE5 538 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 ZNF451Q9Y4E5 1061 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 LRRIQ1Q96JM4 1722 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 SOX14O95416 240 aa16.77■□□□□ 0.28
COL27A1-201ENST00000356083 RPLP0P05388 317 aaKnown RBP16.77■□□□□ 0.28
COL27A1-201ENST00000356083 WSCD2Q2TBF2 565 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms