RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 RSRC1Q96IZ7 334 aaKnown RBP7.94□□□□□ -1.14
CD44-205ENST00000352818 MAGEB10Q96LZ2 347 aaPredicted RBP7.94□□□□□ -1.14
CD44-205ENST00000352818 COQ10AQ96MF6 247 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 CDRT15Q96T59 188 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 NPAS2Q99743 824 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 SPATA16Q9BXB7 569 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 SLC52A3Q9NQ40 469 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 NMRK1Q9NWW6 199 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 ASIC5Q9NY37 505 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 WWOXQ9NZC7 414 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 ABCD2Q9UBJ2 740 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 OPTCQ9UBM4 332 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 PISDQ9UG56 409 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 SUN2Q9UH99 717 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 ADAMTS6Q9UKP5 1117 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 ENTPD4Q9Y227 616 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 BTRCQ9Y297 605 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 ACANP16112 2415 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 COL6A5A8TX70 2615 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 CSPG4Q6UVK1 2322 aa7.94□□□□□ -1.14
CD44-205ENST00000352818 JMJD1CQ15652 2540 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 ATP6AP2A0A1C7CYW4 349 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 SERTM1A2A2V5 107 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 A8MX80 341 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 NPIPB8E9PQR5 432 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 GFYI3L273 518 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 IFRD1O00458 451 aaPredicted RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 ACOT8O14734 319 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 CASQ2O14958 399 aaPredicted RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 NKX2-8O15522 239 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 SGTAO43765 313 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 DUX1O43812 170 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 KATNA1O75449 491 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 STK16O75716 305 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 ATP6AP2O75787 350 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 SLCO2B1O94956 709 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 NPPAP01160 153 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 PDGFAP04085 211 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 ELFN1P0C7U0 828 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 LINC00032P0C843 101 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 LIFP15018 202 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 CYP2A7P20853 494 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 ATP6V1C1P21283 382 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 PRLHRP49683 370 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 ADPRHP54922 357 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 EMX2Q04743 252 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 SRSF11Q05519 484 aaKnown RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 ZNF33BQ06732 778 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 CEACAM7Q14002 265 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 ELAVL3Q14576 367 aaKnown RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 MMEL1Q495T6 779 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 TMEM52BQ4KMG9 183 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 BCL7AQ4VC05 210 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 ATP6AP1LQ52LC2 224 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 SAMD4BQ5PRF9 694 aaKnown RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 ZNF776Q68DI1 518 aaPredicted RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 PAOXQ6QHF9 649 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 BLOC1S3Q6QNY0 202 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 RFLNAQ6ZTI6 216 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 DHDDSQ86SQ9 333 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 NLRP8Q86W28 1048 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 AADATQ8N5Z0 425 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 OR4F6Q8NGB9 312 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 BTN2A2Q8WVV5 523 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 NRG4Q8WWG1 115 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 ASZ1Q8WWH4 475 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 ASB11Q8WXH4 323 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 FBXL8Q96CD0 374 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 CCDC124Q96CT7 223 aaKnown RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 ASB9Q96DX5 294 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 DTD2Q96FN9 168 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 DUS3LQ96G46 650 aaKnown RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 PPP3R2Q96LZ3 170 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 ZNF570Q96NI8 536 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 EGFL8Q99944 293 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 HOPXQ9BPY8 73 aaPredicted RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 GPATCH1Q9BRR8 931 aaKnown RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 TRIM54Q9BYV2 358 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 VCX3BQ9H321 246 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 NOL11Q9H8H0 719 aaKnown RBP7.93□□□□□ -1.14
CD44-205ENST00000352818 PARVBQ9HBI1 364 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 SPAG4Q9NPE6 437 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 GID8Q9NWU2 228 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 CCDC167Q9P0B6 97 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 TMEM181Q9P2C4 612 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 CD300AQ9UGN4 299 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 CROTQ9UKG9 612 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 PDE10AQ9Y233 779 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 MAP4K5Q9Y4K4 846 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 TIMM22Q9Y584 194 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 PTGDR2Q9Y5Y4 395 aa7.93□□□□□ -1.14
CD44-205ENST00000352818 C15orf38-AP3S2A0A0A6YYH1 394 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 FAM234BA2RU67 622 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 PABPN1LA6NDY0 278 aaKnown RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 LRRC72A6NJI9 287 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 FADS2P1A8MWK0 482 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 E7ENX8 843 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 H3BNX3 289 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 SLC28A1O00337 649 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms