RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 EPHX3Q9H6B9 360 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 PDE4DIPQ5VU43 2346 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 LRRK1Q38SD2 2015 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 KIAA1549LQ6ZVL6 1849 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 hCG_2039718K7EN88 272 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 JRKO75564 520 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 ANXA4P09525 319 aaPredicted RBP21.35■■□□□ 1.01
UPF3A-201ENST00000351487 HPCAL1P37235 193 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 MAPK10P53779 464 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 ANXA8L1Q5VT79 327 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 SLCO4C1Q6ZQN7 724 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 NLRP8Q86W28 1048 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 HORMAD1Q86X24 394 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 NPAS3Q8IXF0 933 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 VPS37AQ8NEZ2 397 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 CNIH3Q8TBE1 160 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 HSPBAP1Q96EW2 488 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 EXD2Q9NVH0 621 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 BAG5Q9UL15 447 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 KCNE2Q9Y6J6 123 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 TRIM43BA6NCK2 446 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 MYO1GB0I1T2 1018 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 ANGPTL1O95841 491 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 BCL10O95999 233 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 SRPRAP08240 638 aaKnown RBP21.34■■□□□ 1.01
UPF3A-201ENST00000351487 JUNDP17535 347 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 IDSP22304 550 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 TIA1P31483 386 aaKnown RBP eCLIP21.34■■□□□ 1.01
UPF3A-201ENST00000351487 CXCR4P61073 352 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 PIGFQ07326 219 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 LRRC74AQ0VAA2 488 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 MOGQ16653 247 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 IQCCQ4KMZ1 466 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 ERAP2Q6P179 960 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 GALNT18Q6P9A2 607 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 PARS2Q7L3T8 475 aaKnown RBP21.34■■□□□ 1.01
UPF3A-201ENST00000351487 TRIM43Q96BQ3 446 aaPredicted RBP21.34■■□□□ 1.01
UPF3A-201ENST00000351487 CXorf40BQ96DE9 158 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 FUNDC2Q9BWH2 189 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 GULP1Q9UBP9 304 aa21.34■■□□□ 1.01
UPF3A-201ENST00000351487 FOXD2O60548 495 aaPredicted RBP21.33■■□□□ 1.01
UPF3A-201ENST00000351487 CLK3P49761 638 aaKnown RBP21.33■■□□□ 1.01
UPF3A-201ENST00000351487 LAPTM4AQ15012 233 aa21.33■■□□□ 1.01
UPF3A-201ENST00000351487 ACOX1Q15067 660 aa21.33■■□□□ 1.01
UPF3A-201ENST00000351487 HKDC1Q2TB90 917 aa21.33■■□□□ 1.01
UPF3A-201ENST00000351487 TMEM220Q6QAJ8 160 aa21.33■■□□□ 1.01
UPF3A-201ENST00000351487 SLC16A12Q6ZSM3 486 aa21.33■■□□□ 1.01
UPF3A-201ENST00000351487 OTOP2Q7RTS6 562 aa21.33■■□□□ 1.01
UPF3A-201ENST00000351487 ZFP90Q8TF47 636 aa21.33■■□□□ 1.01
UPF3A-201ENST00000351487 NEIL2Q969S2 332 aa21.33■■□□□ 1.01
UPF3A-201ENST00000351487 RIBC2Q9H4K1 309 aa21.33■■□□□ 1.01
UPF3A-201ENST00000351487 ENPP5Q9UJA9 477 aa21.33■■□□□ 1.01
UPF3A-201ENST00000351487 FZD4Q9ULV1 537 aa21.33■■□□□ 1.01
UPF3A-201ENST00000351487 SAMHD1Q9Y3Z3 626 aaKnown RBP21.33■■□□□ 1.01
UPF3A-201ENST00000351487 PDHA2P29803 388 aa21.33■■□□□ 1
UPF3A-201ENST00000351487 CRYBA2P53672 197 aa21.33■■□□□ 1
UPF3A-201ENST00000351487 GAB1Q13480 694 aa21.33■■□□□ 1
UPF3A-201ENST00000351487 GRIN2CQ14957 1233 aa21.33■■□□□ 1
UPF3A-201ENST00000351487 C10orf62Q5T681 223 aaPredicted RBP21.33■■□□□ 1
UPF3A-201ENST00000351487 MED27Q6P2C8 311 aa21.33■■□□□ 1
UPF3A-201ENST00000351487 XKR5Q6UX68 686 aa21.33■■□□□ 1
UPF3A-201ENST00000351487 B3GNT8Q7Z7M8 397 aa21.33■■□□□ 1
UPF3A-201ENST00000351487 MRPL43Q8N983 215 aaKnown RBP21.33■■□□□ 1
UPF3A-201ENST00000351487 REPS1Q96D71 796 aa21.33■■□□□ 1
UPF3A-201ENST00000351487 WDR34Q96EX3 536 aa21.33■■□□□ 1
UPF3A-201ENST00000351487 SIRT5Q9NXA8 310 aa21.33■■□□□ 1
UPF3A-201ENST00000351487 PDP1Q9P0J1 537 aaPredicted RBP21.33■■□□□ 1
UPF3A-201ENST00000351487 NDRG4Q9ULP0 352 aaKnown RBP21.33■■□□□ 1
UPF3A-201ENST00000351487 RNASET2O00584 256 aaKnown RBP21.32■■□□□ 1
UPF3A-201ENST00000351487 FKBP9O95302 570 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 C1orf105O95561 183 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 HTR1BP28222 390 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 PCGF2P35227 344 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 GP2P55259 537 aaKnown RBP21.32■■□□□ 1
UPF3A-201ENST00000351487 RGNQ15493 299 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 BCL7AQ4VC05 210 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 ANKRD13BQ86YJ7 626 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 DTD2Q96FN9 168 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 DUSP21Q9H596 190 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 REEP1Q9H902 201 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 TBC1D23Q9NUY8 699 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 HCFC2Q9Y5Z7 792 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 hCG_2014768A0A024R1R8 64 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 PTGES3LE9PB15 166 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 H3BM21 787 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 XPNPEP2O43895 674 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 DIRAS1O95057 198 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 HOXA9P31269 272 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 RPS13P62277 151 aaKnown RBP21.32■■□□□ 1
UPF3A-201ENST00000351487 LRRC26Q2I0M4 334 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 POM121L1PQ3SYA9 428 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 PRSS36Q5K4E3 855 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 PLPP4Q5VZY2 271 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 FAHD1Q6P587 224 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 TMPRSS11BQ86T26 416 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 ZNF480Q8WV37 535 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 C7orf34Q96L11 122 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 COQ10AQ96MF6 247 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 APOL4Q9BPW4 351 aa21.32■■□□□ 1
UPF3A-201ENST00000351487 DGCR6LQ9BY27 220 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms