RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 AGAP4Q96P64 663 aa5.79□□□□□ -1.48
RFC1-201ENST00000349703 SLITRK1Q96PX8 696 aa5.79□□□□□ -1.48
RFC1-201ENST00000349703 LPIN3Q9BQK8 851 aa5.79□□□□□ -1.48
RFC1-201ENST00000349703 INPP5KQ9BT40 448 aa5.79□□□□□ -1.48
RFC1-201ENST00000349703 C11orf84Q9BUA3 381 aaPredicted RBP5.79□□□□□ -1.48
RFC1-201ENST00000349703 CALN1Q9BXU9 219 aa5.79□□□□□ -1.48
RFC1-201ENST00000349703 ARHGAP39Q9C0H5 1083 aa5.79□□□□□ -1.48
RFC1-201ENST00000349703 EHD3Q9NZN3 535 aa5.79□□□□□ -1.48
RFC1-201ENST00000349703 C5orf51A6NDU8 294 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 F5H0A9 414 aaPredicted RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 RNASEH1O60930 286 aaKnown RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 GASTP01350 101 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 ALPPP05187 535 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 ALPPL2P10696 532 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 CYP2A7P20853 494 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 BDH1Q02338 343 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 BST1Q10588 318 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 STILQ15468 1287 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 C1QTNF12Q5T7M4 302 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 RNASEH2BQ5TBB1 312 aaKnown RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 CARD17Q5XLA6 110 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 CGB2Q6NT52 195 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 TMEM53Q6P2H8 277 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 IGF2-ASQ6U949 168 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 ADGRA1Q86SQ6 560 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 FAM71AQ8IYT1 594 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 CADM2Q8N3J6 435 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 SPATA6LQ8N4H0 392 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 LINC00116Q8NCU8 138 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 OR4D10Q8NGI6 311 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 IL31RAQ8NI17 732 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 CCDC126Q96EE4 140 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 AKR1E2Q96JD6 320 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 DNAJC1Q96KC8 554 aaKnown RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 C7orf50Q9BRJ6 194 aaKnown RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 CBWD1Q9BRT8 395 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 SDR42E2A6NKP2 422 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 NR5A2O00482 541 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 WDR47O94967 919 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 NXPH3O95157 252 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 PIGNO95427 931 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 C1RP00736 705 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 T-ENOLP0DO92 83 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 CYP19A1P11511 503 aaPredicted RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 CETPP11597 493 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 COX4I1P13073 169 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 IRF2P14316 349 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 MYOGP15173 224 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 BPIP17213 487 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 CDH13P55290 713 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 EEFSECP57772 596 aaKnown RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 DEFA1P59665 94 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 DEFA3P59666 94 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 CYP4F3Q08477 520 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 ILF2Q12905 390 aaKnown RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 PPM1LQ5SGD2 360 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 ARMC12Q5T9G4 340 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 RHBDF2Q6PJF5 856 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 ARSKQ6UWY0 536 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 ZNF720Q7Z2F6 126 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 SCN4BQ8IWT1 228 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 HEXDCQ8WVB3 486 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 SCAMP4Q969E2 229 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 OTUB1Q96FW1 271 aaPredicted RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 SERAC1Q96JX3 654 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 COL25A1Q9BXS0 654 aaPredicted RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 ADNPQ9H2P0 1102 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 ADAMTS10Q9H324 1103 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 PIGUQ9H490 435 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 DIABLOQ9NR28 239 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 C20orf96Q9NUD7 363 aaPredicted RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 IKZF2Q9UKS7 526 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 PIAS3Q9Y6X2 628 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 R4GN57 208 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 MYH10P35580 1976 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 LOC100653049A0A140TA62 436 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 TRPC5OSA6NMA1 111 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 B4E171 279 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 ERAL1O75616 437 aaKnown RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 KRT34O76011 436 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 GLP2RO95838 553 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 POLR2CP19387 275 aaPredicted RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 CD9P21926 228 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 GLRA2P23416 452 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 PTAFRP25105 342 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 TYK2P29597 1187 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 PRDX5P30044 214 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 PNPLA4P41247 253 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 TSPAN7P41732 249 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 KRT6CP48668 564 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 HNRNPFP52597 415 aaKnown RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 AP3M2P53677 418 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 PLOD1Q02809 727 aaPredicted RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 RBPJQ06330 500 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 ZNF829Q3KNS6 432 aaPredicted RBP5.78□□□□□ -1.48
RFC1-201ENST00000349703 ARMCX4Q5H9R4 360 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 TUBA3EQ6PEY2 450 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 HORMAD1Q86X24 394 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 ZBTB44Q8NCP5 570 aa5.78□□□□□ -1.48
RFC1-201ENST00000349703 DMBX1Q8NFW5 382 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms