RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ARF3P61204 181 aaPredicted RBP22.45■■□□□ 1.18
NPAS3-201ENST00000346562 ARF1P84077 181 aaKnown RBP22.45■■□□□ 1.18
NPAS3-201ENST00000346562 SEMA3AQ14563 771 aa22.45■■□□□ 1.18
NPAS3-201ENST00000346562 LIN52Q52LA3 116 aa22.45■■□□□ 1.18
NPAS3-201ENST00000346562 JAGN1Q8N5M9 183 aa22.45■■□□□ 1.18
NPAS3-201ENST00000346562 THEM6Q8WUY1 208 aa22.45■■□□□ 1.18
NPAS3-201ENST00000346562 SLC22A4Q9H015 551 aa22.45■■□□□ 1.18
NPAS3-201ENST00000346562 PMM2O15305 246 aa22.45■■□□□ 1.18
NPAS3-201ENST00000346562 MATN1P21941 496 aa22.45■■□□□ 1.18
NPAS3-201ENST00000346562 GLP1RP43220 463 aa22.45■■□□□ 1.18
NPAS3-201ENST00000346562 C1orf189Q5VU69 101 aa22.45■■□□□ 1.18
NPAS3-201ENST00000346562 CWF19L1Q69YN2 538 aaKnown RBP22.45■■□□□ 1.18
NPAS3-201ENST00000346562 LRRC69Q6ZNQ3 347 aa22.45■■□□□ 1.18
NPAS3-201ENST00000346562 MARCH9Q86YJ5 346 aa22.45■■□□□ 1.18
NPAS3-201ENST00000346562 ADGRB2O60241 1585 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 CHRM5P08912 532 aaPredicted RBP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 PEPDP12955 493 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 MOAP1Q96BY2 351 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 LRRC58Q96CX6 371 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 BCO2Q9BYV7 579 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 KCNH6Q9H252 994 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 A8MT66 165 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 RNF225M0QZC1 329 aaPredicted RBP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 ACOX3O15254 700 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 SLC2A2P11168 524 aaPredicted RBP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 GJA1P17302 382 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 MAPK3P27361 379 aaPredicted RBP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 CLRN1P58418 232 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 PON3Q15166 354 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 SLC25A25Q6KCM7 469 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 TRMT10BQ6PF06 316 aaKnown RBP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 HSDL2Q6YN16 418 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 UNCXA6NJT0 531 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 H3BUI4 141 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 ARL6IP5O75915 188 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 PCBP2Q15366 365 aaKnown RBP eCLIP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 SCGB2B2Q4G0G5 96 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 PRRT3Q5FWE3 981 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 KCNK6Q9Y257 313 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 PCDHGA10Q9Y5H3 936 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 TTC24A2A3L6 582 aaPredicted RBP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 HAPLN1P10915 354 aaPredicted RBP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 OGFOD2Q6N063 350 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 GRASPQ7Z6J2 395 aaPredicted RBP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 IGKV6D-41A0A0C4DH26 115 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 LEFTY2O00292 366 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 RPL10P27635 214 aaKnown RBP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 RPL26P61254 145 aaKnown RBP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 CYP1B1Q16678 543 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 TM9SF2Q99805 663 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.44■■□□□ 1.18
NPAS3-201ENST00000346562 AKTIPQ9H8T0 292 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 CD320Q9NPF0 282 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 PIGVQ9NUD9 493 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 POMPQ9Y244 141 aa22.44■■□□□ 1.18
NPAS3-201ENST00000346562 DNAJB1P25685 340 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 SLC6A6P31641 620 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 CCNHP51946 323 aaPredicted RBP22.43■■□□□ 1.18
NPAS3-201ENST00000346562 MRPL49Q13405 166 aaKnown RBP22.43■■□□□ 1.18
NPAS3-201ENST00000346562 PLEKHG6Q3KR16 790 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 TOMM5Q8N4H5 51 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 ZNF69Q9UC07 566 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 TMEM98Q9Y2Y6 226 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 FOXO6A8MYZ6 492 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 CCND3P30281 292 aaPredicted RBP22.43■■□□□ 1.18
NPAS3-201ENST00000346562 ACVRL1P37023 503 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 AQP4P55087 323 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 CDK6Q00534 326 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 THRSPQ92748 146 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 BORCS8Q96FH0 119 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 SAMD11Q96NU1 681 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 CD180Q99467 661 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 NPLQ9BXD5 320 aaPredicted RBP22.43■■□□□ 1.18
NPAS3-201ENST00000346562 DENND2DQ9H6A0 471 aaPredicted RBP22.43■■□□□ 1.18
NPAS3-201ENST00000346562 EME2A4GXA9 379 aaPredicted RBP22.43■■□□□ 1.18
NPAS3-201ENST00000346562 FGF18O76093 207 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 EIF1AXP47813 144 aaKnown RBP22.43■■□□□ 1.18
NPAS3-201ENST00000346562 CCINQ13939 588 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 NOXRED1Q6NXP6 359 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 TLCD1Q96CP7 247 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 GRHL1Q9NZI5 618 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 J3KR12 359 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 EIF1AYO14602 144 aaKnown RBP22.43■■□□□ 1.18
NPAS3-201ENST00000346562 SLC22A1O15245 554 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 CASP6P55212 293 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 GPAT4Q86UL3 456 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 BRI3BPQ8WY22 251 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 CGREF1Q99674 301 aa22.43■■□□□ 1.18
NPAS3-201ENST00000346562 CADM1Q9BY67 442 aaKnown RBP22.43■■□□□ 1.18
NPAS3-201ENST00000346562 FAM120CQ9NX05 1096 aaKnown RBP22.43■■□□□ 1.18
NPAS3-201ENST00000346562 ITPRIPL2Q3MIP1 535 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 CEACAM20Q6UY09 585 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 OR9A1PQ8NGU1 263 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 TMEM121BQ9BXQ6 578 aaPredicted RBP22.42■■□□□ 1.18
NPAS3-201ENST00000346562 TMEM5Q9Y2B1 443 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 MRC1P22897 1456 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 ARPC2O15144 300 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 ITGB1P05556 798 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 HTR1AP08908 422 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms