RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 DERL2Q9GZP9 239 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 EPN3Q9H201 632 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 TRPC4Q9UBN4 977 aa13.89□□□□□ -0.19
ERCC1-203ENST00000340192 DMGDHQ9UI17 866 aaKnown RBP13.89□□□□□ -0.19
ERCC1-203ENST00000340192 MRPS2Q9Y399 296 aaKnown RBP13.89□□□□□ -0.19
ERCC1-203ENST00000340192 SCN3AQ9NY46 2000 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 IGLV3-12A0A075B6K2 115 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 CTAGE15A4D2H0 777 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 FFAR3O14843 346 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 GPR42O15529 346 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 PRPF4O43172 522 aaKnown RBP eCLIP13.88□□□□□ -0.19
ERCC1-203ENST00000340192 CTAGE8P0CG41 777 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 HNMTP50135 292 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 RAB10P61026 200 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 TLE1Q04724 770 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 FAM53BQ14153 422 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 ZKSCAN8Q15776 578 aaPredicted RBP13.88□□□□□ -0.19
ERCC1-203ENST00000340192 NDUFA9Q16795 377 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 VWA2Q5GFL6 755 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 CATSPEREQ5SY80 951 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 CTAGE6Q86UF2 777 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 THOC6Q86W42 341 aaKnown RBP13.88□□□□□ -0.19
ERCC1-203ENST00000340192 CTAGE4Q8IX94 777 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 TEX19Q8NA77 164 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 OR4K1Q8NGD4 311 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 NEIL2Q969S2 332 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 CRB3Q9BUF7 120 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 YIPF2Q9BWQ6 316 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 SEMA3GQ9NS98 782 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 GPR83Q9NYM4 423 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 FBXL4Q9UKA2 621 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 G3BP2Q9UN86 482 aaKnown RBP13.88□□□□□ -0.19
ERCC1-203ENST00000340192 HS3ST3B1Q9Y662 390 aa13.88□□□□□ -0.19
ERCC1-203ENST00000340192 NCF1BA6NI72 391 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-203ENST00000340192 NCF1CA8MVU1 366 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-203ENST00000340192 OR1F1O43749 312 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 ALOX12BO75342 701 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 NCF1P14598 390 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-203ENST00000340192 AVPR1BP47901 424 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 NAB1Q13506 487 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 CSHL1Q14406 222 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 SLMAPQ14BN4 828 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 TGFBIQ15582 683 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 RBBP7Q16576 425 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 SYT16Q17RD7 645 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 C18orf21Q32NC0 220 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-203ENST00000340192 TMEM214Q6NUQ4 689 aaKnown RBP13.87□□□□□ -0.19
ERCC1-203ENST00000340192 KIRREL2Q6UWL6 708 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 PRSS41Q7RTY9 318 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 ASPGQ86U10 573 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 LAPTM4BQ86VI4 370 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 GALNT16Q8N428 558 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 MFSD9Q8NBP5 474 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 CAMKVQ8NCB2 501 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 ZNF740Q8NDX6 193 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 OR9A4Q8NGU2 314 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 KIF18AQ8NI77 898 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 SLC13A3Q8WWT9 602 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 SLC5A11Q8WWX8 675 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 IFT81Q8WYA0 676 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 RHBDF1Q96CC6 855 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 TRIM44Q96DX7 344 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-203ENST00000340192 UBXN10Q96LJ8 280 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 MESP1Q9BRJ9 268 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 SARGQ9BW04 601 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 FAM129AQ9BZQ8 928 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 MKKSQ9NPJ1 570 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-203ENST00000340192 MTRF1LQ9UGC7 380 aaKnown RBP13.87□□□□□ -0.19
ERCC1-203ENST00000340192 C3orf18Q9UK00 162 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 SLC22A14Q9Y267 594 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 DYRK1BQ9Y463 629 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 ZNF451Q9Y4E5 1061 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 MAP4K5Q9Y4K4 846 aa13.87□□□□□ -0.19
ERCC1-203ENST00000340192 TRBC2A0A5B9 178 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 SLC35G6P0C7Q6 338 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 CD1DP15813 335 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 GMPRP36959 345 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 GDF5P43026 501 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 ATP6V0D1P61421 351 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 MAT1AQ00266 395 aaKnown RBP13.86□□□□□ -0.19
ERCC1-203ENST00000340192 AIMP2Q13155 320 aaKnown RBP13.86□□□□□ -0.19
ERCC1-203ENST00000340192 OR4D1Q15615 310 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 TUBB8Q3ZCM7 444 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 GLE1Q53GS7 698 aaKnown RBP13.86□□□□□ -0.19
ERCC1-203ENST00000340192 UBAP2Q5T6F2 1119 aaKnown RBP13.86□□□□□ -0.19
ERCC1-203ENST00000340192 RAPH1Q70E73 1250 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 CMC1Q7Z7K0 106 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 TBC1D19Q8N5T2 526 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 KCT2Q8NC54 265 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 OR11G2Q8NGC1 345 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 ZCCHC10Q8TBK6 192 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 MRRFQ96E11 262 aaKnown RBP13.86□□□□□ -0.19
ERCC1-203ENST00000340192 SMAD5Q99717 465 aaKnown RBP13.86□□□□□ -0.19
ERCC1-203ENST00000340192 TGIF2Q9GZN2 237 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 SPNS1Q9H2V7 528 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 ATP13A2Q9NQ11 1180 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 C14orf105Q9NVL8 296 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 NINJ2Q9NZG7 142 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 PCDHGB7Q9Y5F8 929 aa13.86□□□□□ -0.19
ERCC1-203ENST00000340192 KCNE2Q9Y6J6 123 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms