RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 NT5DC2Q9H857 520 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 ADGRE2Q9UHX3 823 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 SNX7Q9UNH6 387 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 TSC22D4Q9Y3Q8 395 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 FBP2O00757 339 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 HAT1O14929 419 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 ANKRD28O15084 1053 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 ANGPT2O15123 496 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 NOBOXO60393 691 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 MYO1DO94832 1006 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 SERPIND1P05546 499 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 PRPS2P11908 318 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 SDC1P18827 310 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 CAPN3P20807 821 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 HRH2P25021 359 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 TACR1P25103 407 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 PGM1P36871 562 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 BNC1Q01954 994 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 TBL3Q12788 808 aaKnown RBP14.09□□□□□ -0.15
CBX3-201ENST00000337620 ZNF423Q2M1K9 1284 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 SPIN4Q56A73 249 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 REP15Q6BDI9 236 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 DSELQ8IZU8 1212 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 CHTF18Q8WVB6 975 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 UTP4Q969X6 686 aaKnown RBP14.09□□□□□ -0.15
CBX3-201ENST00000337620 VPS33AQ96AX1 596 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 SPDL1Q96EA4 605 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 SERPINI1Q99574 410 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 ELF4Q99607 663 aaPredicted RBP14.09□□□□□ -0.15
CBX3-201ENST00000337620 THTPAQ9BU02 230 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 RUVBL1Q9Y265 456 aaKnown RBP14.09□□□□□ -0.15
CBX3-201ENST00000337620 TP53BP1Q12888 1972 aaPredicted RBP14.08□□□□□ -0.15
CBX3-201ENST00000337620 TRBC2A0A5B9 178 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 FAM234BA2RU67 622 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 FAM221BA6H8Z2 402 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 C2orf74A8MZ97 194 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 GRIA3P42263 894 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 ZFP36L2P47974 494 aaKnown RBP14.08□□□□□ -0.16
CBX3-201ENST00000337620 ARRB1P49407 418 aaPredicted RBP14.08□□□□□ -0.16
CBX3-201ENST00000337620 RCAN2Q14206 197 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.08□□□□□ -0.16
CBX3-201ENST00000337620 SYT12Q8IV01 421 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 DEFB107AQ8IZN7 70 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 KRTCAP2Q8N6L1 136 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 AVL9Q8NBF6 648 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 FLVCR1-AS1Q8TAF5 88 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 METTL2AQ96IZ6 378 aaKnown RBP14.08□□□□□ -0.16
CBX3-201ENST00000337620 ZBTB18Q99592 522 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 FSCN3Q9NQT6 498 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 NDUFAF1Q9Y375 327 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 ENTPD2Q9Y5L3 495 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 SNRNP200O75643 2136 aaKnown RBP14.08□□□□□ -0.16
CBX3-201ENST00000337620 CCDC154A6NI56 674 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 MRASO14807 208 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 ZW10O43264 779 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 CFIP05156 583 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 DMDP11532 3685 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 HOXB3P14651 431 aaPredicted RBP14.08□□□□□ -0.16
CBX3-201ENST00000337620 JAK1P23458 1154 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 AVPR2P30518 371 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 BCL6P41182 706 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 FASLGP48023 281 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 PPM1FP49593 454 aaPredicted RBP14.08□□□□□ -0.16
CBX3-201ENST00000337620 GOLGA4Q13439 2230 aaKnown RBP14.08□□□□□ -0.16
CBX3-201ENST00000337620 TIGD2Q4W5G0 525 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 ARMC6Q6NXE6 501 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 OOSP2Q86WS3 158 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 SLC25A45Q8N413 288 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 TBC1D19Q8N5T2 526 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 CDC26Q8NHZ8 85 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 ZC3H10Q96K80 434 aaKnown RBP14.08□□□□□ -0.16
CBX3-201ENST00000337620 EGLN2Q96KS0 407 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 SLC38A3Q99624 504 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 KLHL25Q9H0H3 589 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 ZSCAN32Q9NX65 697 aa14.08□□□□□ -0.16
CBX3-201ENST00000337620 TTC28Q96AY4 2481 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 GNG14A0A1W2PPG7 69 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 CFLARO15519 480 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 LRATO95237 230 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 STATHP02808 62 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 ANXA4P09525 319 aaPredicted RBP14.07□□□□□ -0.16
CBX3-201ENST00000337620 MAGP20916 626 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 SERPINB1P30740 379 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 CNR2P34972 360 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 RAE1P78406 368 aaKnown RBP14.07□□□□□ -0.16
CBX3-201ENST00000337620 SIM2Q14190 667 aaPredicted RBP14.07□□□□□ -0.16
CBX3-201ENST00000337620 ZNF425Q6IV72 752 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 OGFOD3Q6PK18 319 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 SPESP1Q6UW49 350 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 C16orf89Q6UX73 402 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 PRR23BQ6ZRT6 265 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 COMMD6Q7Z4G1 85 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 ZNF438Q7Z4V0 828 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 FAM9CQ8IZT9 166 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 PCYOX1LQ8NBM8 494 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 TTLQ8NG68 377 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 RSC1A1Q92681 617 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 GFM2Q969S9 779 aaKnown RBP14.07□□□□□ -0.16
CBX3-201ENST00000337620 FCRL1Q96LA6 429 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 F2RL3Q96RI0 385 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms