RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 HS6ST1O60243 411 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 STK16O75716 305 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 FGF18O76093 207 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 OLFM2O95897 454 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 FTH1P02794 183 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 LCKP06239 509 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 EPB42P16452 691 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 HTR3AP46098 478 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 CLK1P49759 484 aaKnown RBP13.44□□□□□ -0.26
SF1-202ENST00000334944 ALDH3A2P51648 485 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 FXNQ16595 210 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 BCL7AQ4VC05 210 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 TBC1D21Q8IYX1 336 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 SVOPQ8N4V2 548 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 GLB1L3Q8NCI6 653 aaPredicted RBP13.44□□□□□ -0.26
SF1-202ENST00000334944 PDLIM5Q96HC4 596 aaKnown RBP13.44□□□□□ -0.26
SF1-202ENST00000334944 ST6GAL2Q96JF0 529 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 MBOAT4Q96T53 435 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 COPS8Q99627 209 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 DPY30Q9C005 99 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 DCSTAMPQ9H295 470 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 HEBP1Q9NRV9 189 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 ERVK13-1Q9NX77 482 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 TMPRSS11EQ9UL52 423 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 REV3LO60673 3130 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 A8MUA0 341 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 GLUD1P00367 558 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 GPIP06744 558 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 MTHFRP42898 656 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 OR3A3P47888 321 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 DDX39BQ13838 428 aaKnown RBP13.44□□□□□ -0.26
SF1-202ENST00000334944 CBX2Q14781 532 aaPredicted RBP13.44□□□□□ -0.26
SF1-202ENST00000334944 MPPE1Q53F39 396 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 ERAP2Q6P179 960 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 C22orf39Q6P5X5 142 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.44□□□□□ -0.26
SF1-202ENST00000334944 UBE2R2Q712K3 238 aaPredicted RBP13.44□□□□□ -0.26
SF1-202ENST00000334944 DDX53Q86TM3 631 aaKnown RBP13.44□□□□□ -0.26
SF1-202ENST00000334944 SLC13A3Q8WWT9 602 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 PIK3R3Q92569 461 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 ZNF300Q96RE9 604 aaPredicted RBP13.44□□□□□ -0.26
SF1-202ENST00000334944 SUV39H2Q9H5I1 410 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 BRD9Q9H8M2 597 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 RANGRFQ9HD47 186 aaPredicted RBP13.44□□□□□ -0.26
SF1-202ENST00000334944 SLC25A37Q9NYZ2 338 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 NEUROG3Q9Y4Z2 214 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 COL4A6Q14031 1691 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.43□□□□□ -0.26
SF1-202ENST00000334944 MITFO75030 526 aaPredicted RBP13.43□□□□□ -0.26
SF1-202ENST00000334944 CXCL14O95715 111 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 PDYNP01213 254 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 FCGR1AP12314 374 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 EPORP19235 508 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 UQCRC1P31930 480 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 MASP1P48740 699 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 NTHL1P78549 312 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 SIM2Q14190 667 aaPredicted RBP13.43□□□□□ -0.26
SF1-202ENST00000334944 MAPKAPK3Q16644 382 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 ANKRD33Q7Z3H0 272 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 TMC8Q8IU68 726 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 PARP16Q8N5Y8 322 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 LILRA3Q8N6C8 439 aaPredicted RBP13.43□□□□□ -0.26
SF1-202ENST00000334944 FIBINQ8TAL6 211 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 ITFG1Q8TB96 612 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 SNAPC3Q92966 411 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 ZNF689Q96CS4 500 aaPredicted RBP13.43□□□□□ -0.26
SF1-202ENST00000334944 EBPLQ9BY08 206 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 ACPTQ9BZG2 426 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 LRTM1Q9HBL6 345 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 SLC22A14Q9Y267 594 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 TRAV19A0A0A6YYK7 116 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 TMEM202A6NGA9 273 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 HIDE1A8MVS5 230 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 MANBAO00462 879 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 WDR47O94967 919 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 CD9P21926 228 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 ENPP1P22413 925 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 PPP3CCP48454 512 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
SF1-202ENST00000334944 WDR5P61964 334 aaKnown RBP13.43□□□□□ -0.26
SF1-202ENST00000334944 SNRPD1P62314 119 aaKnown RBP13.43□□□□□ -0.26
SF1-202ENST00000334944 CD83Q01151 205 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 FOXM1Q08050 763 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 SLAMF1Q13291 335 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 NKG7Q16617 165 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 LAIR1Q6GTX8 287 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 SPRED2Q7Z698 418 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 NRARPQ7Z6K4 114 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 GALNT10Q86SR1 603 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 PHF10Q8WUB8 498 aaKnown RBP13.43□□□□□ -0.26
SF1-202ENST00000334944 ISG20Q96AZ6 181 aaKnown RBP13.43□□□□□ -0.26
SF1-202ENST00000334944 SCRN2Q96FV2 425 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 ZNF583Q96ND8 569 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 OR52E6Q96RD3 313 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 SNX18Q96RF0 628 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 HTATIP2Q9BUP3 242 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 KCNN3Q9UGI6 736 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 LIMD1Q9UGP4 676 aa13.43□□□□□ -0.26
SF1-202ENST00000334944 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.43□□□□□ -0.26
SF1-202ENST00000334944 TRBV5-4A0A0C4DH59 114 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms