RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 C16orf47Q6ZP98 133 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CLEC17AQ6ZS10 378 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 C8orf86Q6ZUL3 223 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 FAM214BQ7L5A3 538 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 BRAPQ7Z569 592 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TAF8Q7Z7C8 310 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PHF13Q86YI8 300 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CPOQ8IVL8 374 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF786Q8N393 782 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GPR137CQ8N3F9 429 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 RTL3Q8N8U3 475 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ZDHHC22Q8N966 263 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 L3MBTL4Q8NA19 623 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 OR4K1Q8NGD4 311 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 OR5R1Q8NH85 324 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 WDR20Q8TBZ3 569 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ENOX1Q8TC92 643 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GATAD1Q8WUU5 269 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TMEM171Q8WVE6 324 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 DYRK2Q92630 601 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 UPRTQ96BW1 309 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 METTL2AQ96IZ6 378 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ACOX2Q99424 681 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MAGEB5Q9BZ81 275 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ULBP3Q9BZM4 244 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LAT2Q9GZY6 243 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 C1orf198Q9H425 327 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 BEX1Q9HBH7 125 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LYRM4Q9HD34 91 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TCF7L2Q9NQB0 619 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 KBTBD4Q9NVX7 518 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ZNHIT6Q9NWK9 470 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ABI2Q9NYB9 513 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 FAM53CQ9NYF3 392 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 WWOXQ9NZC7 414 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CPSF2Q9P2I0 782 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MYO1AQ9UBC5 1043 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GPN3Q9UHW5 284 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 FBXL4Q9UKA2 621 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NAP1L2Q9ULW6 460 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GPC6Q9Y625 555 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SIRT4Q9Y6E7 314 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SLCO1B1Q9Y6L6 691 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NUMA1Q14980 2115 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 A0A1W2PP55 124 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ANTXRLA6NF34 631 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MINDY4BA8MYZ0 360 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 INO80B-WBP1J3KQ70 363 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MYO1CO00159 1063 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 AP3B1O00203 1094 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SLC27A2O14975 620 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MDM4O15151 490 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 RAD51BO15315 384 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 DEAF1O75398 565 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MED24O75448 989 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 BCAS2O75934 225 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GNA14O95837 355 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PEX11BO96011 259 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 IGLV1-44P01699 117 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PABPC4LP0CB38 370 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CBSLP0DN79 551 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MMP8P22894 467 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PTGS2P35354 604 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CBSP35520 551 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 UGT2B10P36537 528 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PIK3CBP42338 1070 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ARF5P84085 180 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 OS9Q13438 667 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CRYMQ14894 314 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SETDB1Q15047 1291 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CEBPEQ15744 281 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SSX1Q16384 188 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NKG7Q16617 165 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NKPD1Q17RQ9 610 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SLC25A52Q3SY17 297 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 WIPI1Q5MNZ9 446 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CCDC183Q5T5S1 534 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 RNF219Q5W0B1 726 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CRTC1Q6UUV9 634 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 KIRREL2Q6UWL6 708 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 GK5Q6ZS86 529 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SEM1Q6ZVN7 128 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 UBE2R2Q712K3 238 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SRLQ86TD4 932 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PTRH1Q86Y79 214 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MISPQ8IVT2 679 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ZC3H7AQ8IWR0 971 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LMNTD2Q8IXW0 634 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CCAR2Q8N163 923 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CFAP52Q8N1V2 620 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ZFP41Q8N8Y5 198 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ATAD1Q8NBU5 361 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 RNF169Q8NCN4 708 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 FAM156AQ8NDB6 213 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 OR14A16Q8NHC5 309 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LILRB1Q8NHL6 650 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 FBXO27Q8NI29 283 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 EDARADDQ8WWZ3 215 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 MRPL24Q96A35 216 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CALML4Q96GE6 196 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms