RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SYT16Q17RD7 645 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 ZNF630Q2M218 657 aaPredicted RBP13.46□□□□□ -0.25
RPP40-201ENST00000319533 ABHD17BQ5VST6 288 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 CES3Q6UWW8 571 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 MRGPRGQ86SM5 289 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 CILP2Q8IUL8 1156 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 OTUD6BQ8N6M0 293 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 AMER2Q8N7J2 671 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 SUN3Q8TAQ9 357 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 ASB11Q8WXH4 323 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 NAPGQ99747 312 aaPredicted RBP13.46□□□□□ -0.25
RPP40-201ENST00000319533 XAB2Q9HCS7 855 aaKnown RBP13.46□□□□□ -0.25
RPP40-201ENST00000319533 CHST11Q9NPF2 352 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 INTS10Q9NVR2 710 aaKnown RBP13.46□□□□□ -0.25
RPP40-201ENST00000319533 STMN3Q9NZ72 180 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 PCYOX1Q9UHG3 505 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 CRYL1Q9Y2S2 319 aa13.46□□□□□ -0.25
RPP40-201ENST00000319533 PKDREJQ9NTG1 2253 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 KCNE1BA0A087WTH5 132 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 TRGV8A0A0C4DH27 118 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 GOLGA8KD6RF30 607 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 GOLGA8TH3BQL2 631 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 GFYI3L273 518 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 CCL21O00585 134 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 HAT1O14929 419 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 NSA2O95478 260 aaKnown RBP13.45□□□□□ -0.26
RPP40-201ENST00000319533 MPC1LP0DKB6 136 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 C8orf89P0DMQ9 161 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 SKIV2L2P42285 1042 aaKnown RBP13.45□□□□□ -0.26
RPP40-201ENST00000319533 MAT1AQ00266 395 aaKnown RBP13.45□□□□□ -0.26
RPP40-201ENST00000319533 NDUFA9Q16795 377 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 KCTD19Q17RG1 926 aaPredicted RBP13.45□□□□□ -0.26
RPP40-201ENST00000319533 PLAG1Q6DJT9 500 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 CASC4Q6P4E1 433 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 CYHR1Q6ZMK1 362 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 PCGF5Q86SE9 256 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 MCUQ8NE86 351 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 FAM136AQ96C01 138 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 CYTH2Q99418 400 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 SLC30A3Q99726 388 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 EBNA1BP2Q99848 306 aaKnown RBP13.45□□□□□ -0.26
RPP40-201ENST00000319533 VN1R1Q9GZP7 353 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 SAMD15Q9P1V8 674 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 TEKT2Q9UIF3 430 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 TSR3Q9UJK0 312 aaKnown RBP13.45□□□□□ -0.26
RPP40-201ENST00000319533 VPS9D1Q9Y2B5 631 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 MED16Q9Y2X0 877 aa13.45□□□□□ -0.26
RPP40-201ENST00000319533 SCN2AQ99250 2005 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 CTAGE9A4FU28 777 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 SMAPO00193 183 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 MLNP12872 115 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 PAMP19021 973 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 AGAP20933 346 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 HRH2P25021 359 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 HTR1EP28566 365 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 AVPR1BP47901 424 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 ZNF33BQ06732 778 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 LONRF1Q17RB8 773 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 TTLL9Q3SXZ7 439 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 ANKRD22Q5VYY1 191 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 NEPROQ6NW34 567 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 XKRXQ6PP77 449 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 VN1R4Q7Z5H5 301 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 CPEB2Q7Z5Q1 589 aaKnown RBP13.44□□□□□ -0.26
RPP40-201ENST00000319533 PPFIBP2Q8ND30 876 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 OR9A4Q8NGU2 314 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 GIMAP7Q8NHV1 300 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 METTL21AQ8WXB1 218 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 CAPZA3Q96KX2 299 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 RUNDC3BQ96NL0 473 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 DDX47Q9H0S4 455 aaKnown RBP13.44□□□□□ -0.26
RPP40-201ENST00000319533 ZNF835Q9Y2P0 537 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 SAR1BQ9Y6B6 198 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 DCHS2Q6V1P9 2916 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 POLQO75417 2590 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 NCOA6Q14686 2063 aaPredicted RBP13.44□□□□□ -0.26
RPP40-201ENST00000319533 PCNX1Q96RV3 2341 aa13.44□□□□□ -0.26
RPP40-201ENST00000319533 MAGEB16A2A368 324 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 SDR42E2A6NKP2 422 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 E5RI56 91 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 GOLGA8MH3BSY2 632 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 WISP2O76076 250 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 UQCRHP07919 91 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 ENO3P13929 434 aaPredicted RBP13.43□□□□□ -0.26
RPP40-201ENST00000319533 IMPA1P29218 277 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 ETF1P62495 437 aaKnown RBP13.43□□□□□ -0.26
RPP40-201ENST00000319533 RBPJQ06330 500 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 TSTA3Q13630 321 aaPredicted RBP13.43□□□□□ -0.26
RPP40-201ENST00000319533 PTK6Q13882 451 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 ZNF766Q5HY98 468 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 ACER2Q5QJU3 275 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 TMEM214Q6NUQ4 689 aaKnown RBP13.43□□□□□ -0.26
RPP40-201ENST00000319533 SYT10Q6XYQ8 523 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 Q6ZPB1 254 aaPredicted RBP13.43□□□□□ -0.26
RPP40-201ENST00000319533 LANCL3Q6ZV70 420 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 GDF7Q7Z4P5 450 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 PLD3Q8IV08 490 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 PPIL6Q8IXY8 311 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 MDS2Q8NDY4 140 aa13.43□□□□□ -0.26
RPP40-201ENST00000319533 THAP3Q8WTV1 239 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms